Gene
RNA
| Item | Value |
|---|---|
| gene id | phpt1 |
| gene name | phpt1 |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048593.1 |
| NCBI id | CM023247.2 |
| chromosome length | 47748341 |
| location | 24227401 ~ 24231728 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| symbol | description |
|---|---|
| phpt1 | Predicted to enable protein histidine phosphatase activity. Predicted to be involved in peptidyl-histidine dephosphorylation. Predicted to be located in cytoplasm. Predicted to be active in cytosol. Orthologous to human PHPT1 (phosphohistidine phosphatase 1). |
| description |
|---|
| 14 kDa phosphohistidine phosphatase-like |
| id | name | namespace |
|---|---|---|
| GO:0035971 | peptidyl-histidine dephosphorylation | biological_process |
| GO:0005829 | cytosol | cellular_component |
| id | description |
|---|---|
| K01112 | PHPT1; phosphohistidine phosphatase |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_021590993.2 | True | 1000 | mRNA | 0.43 | 3 | 24227401 | 24231728 |
24,225,000
24,226,000
24,227,000
24,228,000
24,229,000
24,230,000
24,231,000
24,231,000
24,232,000
24,233,000
24,234,000
24,235,000
24,236,000
24,237,000
NC_048593.1
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| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| mamdc4 | mamdc4 | coding | downstream | 871 | 24209393 ~ 24226530 (-) |
| LOC110509846 | NA | coding | downstream | 19980 | 24201402 ~ 24207421 (-) |
| arrdc1b | LOC106563241 | coding | downstream | 31435 | 24126958 ~ 24195966 (-) |
| LOC110509841 | LOC106563247 | coding | downstream | 348563 | 23853359 ~ 23878838 (-) |
| LOC110509835 | spr | coding | downstream | 464799 | 23760130 ~ 23762602 (-) |
| LOC110509849 | enp2 | coding | upstream | 41 | 24231769 ~ 24286433 (-) |
| LOC110509851 | LOC106563238 | coding | upstream | 60233 | 24291961 ~ 24321029 (-) |
| LOC110509852 | LOC106563237 | coding | upstream | 116112 | 24347840 ~ 24354676 (-) |
| LOC110509855 | gtf3c5 | coding | upstream | 151580 | 24383308 ~ 24395796 (-) |
| LOC110509347 | LOC106565457 | coding | upstream | 169027 | 24400755 ~ 24407113 (-) |
| G2167281 | NA | non-coding | downstream | 152529 | 24035813 ~ 24074872 (-) |
| G2167316 | NA | non-coding | downstream | 177141 | 24049939 ~ 24050260 (-) |
| G2167314 | NA | non-coding | downstream | 181791 | 24044456 ~ 24045610 (-) |
| G2167303 | NA | non-coding | downstream | 207290 | 24018086 ~ 24020111 (-) |
| G2167217 | NA | non-coding | downstream | 340025 | 23887074 ~ 23887376 (-) |
| G2167464 | NA | non-coding | upstream | 91155 | 24322883 ~ 24323093 (-) |
| G2167465 | NA | non-coding | upstream | 91523 | 24323251 ~ 24323464 (-) |
| G2167476 | NA | non-coding | upstream | 104052 | 24335780 ~ 24336344 (-) |
| G2167479 | NA | non-coding | upstream | 108039 | 24339767 ~ 24340045 (-) |
| G2167503 | NA | non-coding | upstream | 134673 | 24366401 ~ 24366892 (-) |
| LOC110509827 | LOC106563259 | other | downstream | 681388 | 23540883 ~ 23552798 (-) |
| G2163923 | NA | other | downstream | 2614440 | 21612563 ~ 21612961 (-) |
| G2163913 | NA | other | downstream | 2629906 | 21596551 ~ 21597495 (-) |
| rabepk | rabepk | other | downstream | 3081064 | 21138218 ~ 21146494 (-) |
| surf4 | LOC106563281 | other | downstream | 3250453 | 20970332 ~ 20978032 (-) |
| LOC110509858 | LOC106563233 | other | upstream | 298462 | 24530156 ~ 24537449 (-) |
| G2167965 | LOC106563228 | other | upstream | 615425 | 24847153 ~ 24869810 (-) |
| LOC110509868 | LOC106563221 | other | upstream | 1231663 | 25447869 ~ 25528834 (-) |
