LOC110510035 (LOC106563537)


Basic Information

Item Value
gene id LOC110510035
gene name LOC106563537
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048593.1
NCBI id CM023247.2
chromosome length 47748341
location 31683644 ~ 31687101 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>LOC110510035
gataagatttttttttttaattaatcaattttagaataaggctgtaatgtaacaaaatgaggaTAAAGGGAGGGGtgtttcgaatgcactgtatgtatggaaTACATGGAATTGGTATGTGATGAATAAGTCCTGCACACAATGTGcttattttcttttcttttttttatcaggattaatatttgatttgatgtgtatgGAATTGTTTCCTGAAATATGCATGAAAGGACAGTAATTACCCAGAATTCTGCACCTTTGGATAGTTGTACTTCCAATTTTGATCATCATGATTTAGTGACTGCAAAGAATGTACTGGGATTTTTAAAAGACAGATTCACTTTTTGTTTTGTCTGCATGGACCCAAGAGATAAGTATGGTTTCATTAGTCTTTTTGTCTGCATGGACCCAAGAGATAAGTATGGTTTCATTAGTCTTTTTGTCTGCATGGACCCAAGAGATAAGTATGGTTGCATTAGTCTTTTTGTCTGCATGGACCCAAGAGATAAGTATGGTTTCATTAGTCTTTTTGTCTGCATGGACCCAAGAGATAAGTATGGTTGCATTAGTCTTTTTGTCTGCATGGACCCAAGAGATAAGTATGGTTGCATTAGTCTTTTTGTCTGCATGGACCCAAGAGATAAGTATGGTTGCATTAGACTTTTTGTCTGCATGGACCCAAGAGATAAGTATGGTTGCATTAGTCTTTTTGTCTGCATGGACCCAAGAGATAAGTATGGTTGCATTAGTCTTTTTGTCTGCATGGACCCAAGAGATAAGTATGGTTGCATTAGTCTTTTTGTCTGCATGGACCCAAGAGATAACTATGGTTGCATTAGTCTTTTTGTCTGCATGGACCCAAGAGATAAGTATGGTTGCATTAGTCTTTTTGTCTGCATGGACCCAAGAGATAACTATGGTTGCATTAGTCTTTTTGTCTGCATGGACCCAAGAGATAAGTATGGTTGCATTAGACTTTTTGCAGGcagtcatttttttaaatgaatgtatTTGCTATTATGACAGTATAATATAGTTTcgattactatttatattttaggAAGGCAACTACATTTTGAAAACACATTTACTGTTTTGCAACAGAGTTCTGTGTCTTGTGGACTCTGTTTTTAAAATCGACAACATTGTTCCAAAAAATGCTTGTACGCATTTGAAAAAACTGTAAATGGCTTACTTTCAAACTCTTGTTTCTTGTGTCGTTACCAATGATGGCTTCAGCTCCAAGCTCCTGGTGTGGGACTTAGGAGGAGGTGATTGTGAAACAGACAGTCCAGATGCACTGAGCTCCCTGCAGTTTGTGAGTGACACTGTATTTCTCGCTTGTGCCTGCAATGGTGACCTGTATGTGGGGGACACACGGAAGCCTTCAGCTCTTCAGCAAACCccaggtggagggagagagggagcccAATGGTGTATGGGTGTTTGACAGACCTGTTCTCATCAGACCCATCCTCCTGTAGTGTAGCACggctctcctcctcctgccaAGTGTTTGTGTCTGATCTTAGGGACCTAAGAGCCCCCTTGAGTAAAGCCCAGCTtgatgtccagaggaaaactaccgATAATGACTTCCTGAAGGTGACTTGGGCGCCAGCTTTAGACAACTGCCTTGCAGTTTCAGGTTTTGATGGAATGGTGCAAATCTACAACGCTGCCTCTTGGAGAGTTGGTGGAATTCCAGCCTATTTTTGTCCACCGTGGTCACATGATGACTGAGGATCAGTTTGACACTTCATCAGCTGTGGTCACAACTCATGTTTAGCATCCAAGTCGACCtaagactgtcctctctgctgctGTAGACGGGTCTGTGCATGTATGGGACTGGGTCGACAAAGCCACTGCCAGCTGTTGACATTCAAACAAACTTACAGTTCAATGTTAATCATTACGCAGCTTTGGACCTTGCCTGAAgtctaaatatttttttcattatgtAAATATGTAAGGAAAAAACATCCTCTGTAAAGCACAATTTATTGGGATGGGATAAGATGATGTAAAAATACACTGTTATGAGTAGTTATTCAATGCTATGAGTAGTTATTCAATGCTGTGAGTAGTTATTCAATGCTATGAGTAGTTGTTCCATGCTACTCATAGCTGTTCCATGCTATGAGTAGATGTTCCATACTAGGAGTAGTTGTTCCATGCTATGAGTAGTTATTACATACTAGGAGTAGTTATTACATACTATGAGTAGTTGTTCCATGCTATGAGTAGTTATTACATACTAGGAGTAGTTATTACATACTATGAGTAGTTGTTCCATGCTATGAGTAGTTATTACATACTATGAGTAGTTATTACATACTATGAGTAGTTGTTCCATGCTATGAGTAGTTATTACATACTATGAGTAGTTATTACATACTATGAGTAGTTATTACATACTATGAGTAGTTGTTCCATGCTATGAGTAGTTGTTCCATGCTATGAGTAGTTATTACATGCTATGAGTAGTTATTACATACTATGAGTAGTTATTACATACTATGAGTAGTTGTTCCATACTAGGAGTAGTTGTTCCATGCTATGAGTAGTTATTACATAATAGGAGTAGTTATTACATACTATGAGTAGTTGTTCCATGCTATGAGTAGTTATTACATACTATGAGTAGTTATTACATACTATGAGTAGTTGTTCCATGCTATGAGTAGTTGTTCCATGCTATGAGTAGTTGTTCCATGCTATGAGTAGTTATTACATACTATGAGTAGTTATTCTTAAACTGTACACAGCGTTGCATTATGGAAGAGGTATTCTGAGTTTATATTATTATACAAtacattcgaaaagtattca

Function

NR:

description
PREDICTED: WD repeat-containing protein 73-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
LOC110510035 True 2832 mRNA 0.38 3 31683644 31687101

Neighbor

gene id symbol gene type direction distance location
LOC110510028 psmb6 coding downstream 70077 31610543 ~ 31613567 (-)
LOC118945265 inca1 coding downstream 73234 31608260 ~ 31610410 (-)
tnfsf13 tnfsf13 coding downstream 76415 31604094 ~ 31607229 (-)
LOC118945266 NA coding downstream 123488 31558833 ~ 31560156 (-)
LOC118945323 NA coding downstream 379614 31297252 ~ 31304030 (-)
LOC110510037 LOC106563414 coding upstream 40702 31726537 ~ 31731451 (-)
LOC110509376 LOC107567170 coding upstream 49612 31736713 ~ 31738259 (-)
LOC110510038 sycn coding upstream 52801 31739902 ~ 31740562 (-)
selenow1 selenow coding upstream 60649 31747750 ~ 31750431 (-)
ehd2a LOC106563411 coding upstream 60649 31747750 ~ 31755799 (-)
G2175459 NA non-coding downstream 23955 31657109 ~ 31659689 (-)
G2175441 NA non-coding downstream 31445 31630753 ~ 31652199 (-)
G2175451 NA non-coding downstream 41507 31638999 ~ 31642137 (-)
G2175417 NA non-coding downstream 81255 31602171 ~ 31602389 (-)
G2175489 NA non-coding upstream 19940 31707041 ~ 31707373 (-)
G2175491 NA non-coding upstream 23708 31710809 ~ 31711045 (-)
G2175480 NA non-coding upstream 33397 31720498 ~ 31797706 (-)
G2175476 selenow non-coding upstream 60672 31747773 ~ 31750415 (-)
G2175512 NA non-coding upstream 74929 31762030 ~ 31762658 (-)
G2175420 NA other downstream 10455 31669334 ~ 31673189 (-)
G2175135 NA other downstream 162456 31520052 ~ 31521188 (-)
G2174894 NA other downstream 677209 31003755 ~ 31006435 (-)
G2174463 NA other downstream 1010543 30672590 ~ 30673101 (-)
LOC110510010 requ other downstream 1370863 30299615 ~ 30312873 (-)
G2175503 NA other upstream 34851 31721952 ~ 31726394 (-)
G2175969 LOC100194703 other upstream 576182 32263283 ~ 32266089 (-)
LOC110510065 LOC106603070 other upstream 597649 32282188 ~ 32287263 (-)

Expression


Co-expression Network