LOC118945287


Basic Information

Item Value
gene id LOC118945287
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048593.1
NCBI id CM023247.2
chromosome length 47748341
location 32954859 ~ 32957801 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036967712.1
ATGCCCAGCACTATCCAGCCTGCCCAGCACTACCCAGCCGATCCGACACTACCAGCCAACCGAACACTACCCAGCTTGCCCGGCCTGCCCAACCTGCCCAACACTACCCAGCCTGCCCAGCACTACCCAGTACTATCCAAGCACTATCCAGCCTGCCCAGCACTACCCAGTACTACCCAGCCTGCCCAGCACTATCCAGCCTGCCCAGCAGTGTCCAGCCTGCCCAACCTGCCCAGCACTACCCAGCCTGCCAAGCACTATCCAGTACTACCCAGCACTACCAGTACTACCAAGCACTATCCAGCCTGCCCAGCATTACCCAGTACTACCAAGCACTACCCAGCCTGCCCAGCGTTACCCAACACTACCCAACACTACCCAGCCTACCCAACACTACACAGACTGCCCAGCCTGCCCAGTACTACCCGGCCTGCCCAACCTGTCCAGCACTACCCAGCCTGCCCAGCACTATCCAGCCTACCCAGCACTACCCAGCCTGCCCAGCACTATCCAGCCAGCCCATCTGCCCGGCACTACCCAGCCGACCCGACACTACCCAGCACCACCCAGCCGACCCAACACTACCCAGGCTGCCCAACACTACCCAGCCTGCCCAGTACTACCCGGCATGCCCAACCTGCCCAGTACTACCCAGCCTGCCCAACCTGCCCAACACTACCCAGCCTGCCCAACACTACCCAGTACTACCAAGCACTATCCAGCCTGCCCAGCACTATCCAGCCTGCCCAGCATTACCCAGGACTACCCAGCCTGACCAGCACTATCCAGCTTGCCCAGCACTATCCAGCCTGCCCAGCACTATCCAGCCTGCCCAGCATTATCCAGTACTACCCAGCACTATCCAGCCTGCCCAGCACTATCCATCCTGCCCAGCATTATCCATTACTAACAAGCACTACCCAGCCTGCCCAACACTACCCAGCCTGCCCAGCACTATCCAGCCTACCCAGCACTATCCAGCCTGCCAAACACTACCCAGCCTGCCCAACCTGCCCAGCACTACCCAGCCTGCCAAGCACTATCCAGTACTACCCAGCACTACCAGTACTACCAAGCACTATCCAGCCTTCCCAGCATTACCCAGTACTACCAACACTACCCAGCCGATCCGACACTACCCAGCCAACCGAACACTACCCAGTTTGCCCAACCTGCCCAACACTACCCAGCCTGCCCAGCACTACCCAGTACTACCAAGCACTATCCAGCCTGCCCAGCACTAACAAGCCTGCACCGCATTACCCAGTACTACCCAGCCTGCCCAGCACTATCCAGCCTGCCCAGCACTATCCAGCCTGCCCAACCTGCCCAGCACTACCCAGCCTGCCAAGCACTATCCAGTACTACCCAGCACTACCAGTACTACCAAGCACTATCCAGCCTGCTCAGCATTACCCAGTACTACCAAGCACTACCCAGCCTGCCCAGCGTTACCCAACACTACCCAGCCTACCCAACACTACCCACACTGCCCAGCCTGCCCAGTACTACCCGGCCTGCCCAACCTGTCCAGCACTACCCAGCCTGCCCAGCACTATCCAGCCTACCCAGCACTACCCAGCCTGCCCAGCACTATCCAGCCAGCCCATCTGCCCAGCACTACCCAGCCGACCCGACACTACCCAGCCGACCCGACACTACCCAGCCAACCCAGCACTACCCAGCCGACCTAACACTACCCAGGCTGCCCAACACTACCCAGCCTACCCAGCACTACCCAGCCTGCCCAGCCTGCCAAACACTATCCAGCCTGCCCAGTACTACCAGGCGTCCCCAGTACTACCCGGCCTGCCCAACCTGCCCAGTACTACCCAGCCTGCCCAGCCTGCCCAGCATTACCCAGTACTACCCAGCCTGCCCAGCACTATCCAGTACCTCCAAGCACTATCCAGCCTGTCCAGTATTACCCAGGACTACCAAGCACTATCCAGCCTGCCCAGCATTACCCAGTACTACCAAGCACTATCCAGCCTGTCCAGCACTATCCAGCTGCCCAGCACTACCCAGCCGACCCGACACTACCCAGCCAACCCAACACTACCCAGCTTGCCCTGCCTGCCCAACCTGCCCAGCACTATCCAGCCTGCCCAGCATTACCCAGTACTACCAAGCACTATCCAGCCTGCCCAGCACTACCCAGCCTGCCCAGCACTACCCAGCCTGCCCAGCACTACCCAGTACTACCAAGCACTATCCAGACTGACCAGCACTATCCAACCTGCCCAGCACTACCCAGCCTGCCCAGCACTACCCAGCCTGCCCAGCACTACCCAGCCTGCTCAGCACTATTCAGCCTGCCCATCTTCCCAGCACTACCCATTCCACCCAACACTACCCAGTCTACCCAACACTACCCAGCCTACCCAACACTACCCAGCCTGCCCAGCCTGCCCAGTACTACCCAGCCTGCCCAGCACTACCCAGCCTGCCCAGCACTACCCAATCTGCCCAGCACTGCGCAGGACTACCCAGCCCACCCAACACTATCCAGCCTGCCCAGCACTACCCAGCCTGCCCAGCCTGCCCAGTACTACCCAGCCTGCCCAGCACTACCCAGCCGACCCGACACTACCCGTCCTGCCCAGCACTGCGCAGGACTACCCAGCCCACCCAACACTATCCAGCCTGCCCAGCACTATCCAGCCTGCCCAGCACTACCCAGCACAACCCAGCCTACTGAACACTACCCACCCGACCCAGCACTACCCAGCCAGCCCAGCATACCCAGCATTACCCATTACTACCCAGCACCACCCAGCCTGCCCAGCACTACCCACCCCGCCCAGCACTACCCAGCCTGCCCAGCACTACCCAGGCTACCCAACACTACCCAGCCGACCCAACACTACCCAGGCTGCCCAGCACCACAGGAACAGGAGAGGATCTCTGCCTCATCTCAACTGCTCCAACCCTTTGTTTTAA

Function

NR:

description
PREDICTED: adhesive plaque matrix protein-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036967712.1 True 2943 mRNA 0.61 1 32954859 32957801

Neighbor

gene id symbol gene type direction distance location
LOC118945341 NA coding downstream 38635 32905087 ~ 32916224 (-)
si:ch211-107p11.3 LOC106563619 coding downstream 110548 32842113 ~ 32844311 (-)
LOC110510097 LOC106563615 coding downstream 141262 32800580 ~ 32813597 (-)
si:dkey-251i10.1 LOC106563614 coding downstream 154946 32797625 ~ 32799913 (-)
LOC110510092 cssa11h3orf30 coding downstream 227857 32718378 ~ 32727002 (-)
kif20a LOC106563621 coding upstream 53437 33011238 ~ 33019372 (-)
trnaa-agc-231 NA coding upstream 62390 33020191 ~ 33020263 (-)
LOC110510107 djc18 coding upstream 83144 33040945 ~ 33058157 (-)
ecscr LOC106563624 coding upstream 104650 33062451 ~ 33066498 (-)
ppp3ca UBE2D2 coding upstream 109104 33066905 ~ 33205175 (-)
G2176515 NA non-coding downstream 7686 32946747 ~ 32947173 (-)
G2176506 NA non-coding downstream 22768 32931387 ~ 32932091 (-)
G2176470 NA non-coding downstream 94193 32860101 ~ 32860666 (-)
G2176465 NA non-coding downstream 103881 32850745 ~ 32850978 (-)
G2176464 NA non-coding downstream 104643 32850001 ~ 32850216 (-)
G2176544 NA non-coding upstream 29172 32986973 ~ 32987250 (-)
G2176549 NA non-coding upstream 32620 32990421 ~ 32990708 (-)
G2176550 NA non-coding upstream 32949 32990750 ~ 32990971 (-)
G2176552 NA non-coding upstream 35824 32993625 ~ 32993868 (-)
G2176596 NA non-coding upstream 81143 33038944 ~ 33039150 (-)
G2176363 NA other downstream 310287 32643402 ~ 32644572 (-)
cpi1 cpi1 other downstream 521218 32395346 ~ 32433641 (-)
LOC110510065 LOC106603070 other downstream 669376 32282188 ~ 32287263 (-)
G2175969 LOC100194703 other downstream 688770 32263283 ~ 32266089 (-)
LOC110509376 LOC107567170 other downstream 1216624 31736713 ~ 31738259 (-)
G2177695 NA other upstream 553495 33511296 ~ 33512326 (-)
G2177991 cfb other upstream 1163681 34092047 ~ 34216247 (-)
LOC110510135 LOC106563696 other upstream 1381110 34338911 ~ 34342460 (-)
G2178372 NA other upstream 1845390 34792330 ~ 34809382 (-)
G2179862 NA other upstream 3004183 35961984 ~ 35962832 (-)

Expression


Co-expression Network