trnaa-agc-231



Basic Information


Item Value
gene id trnaa-agc-231
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048593.1
NCBI id CM023247.2
chromosome length 47748341
location 33020191 ~ 33020263 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>trnaa-agc-231
gggggattagctcaaatggtagagcgctcgcttagcatgcgagaggtagcgggatcgatgcccgcatcctcca

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
trnaa-agc-231 True 73 mRNA 0.59 1 33020191 33020263

Neighbor


gene id symbol gene type direction distance location
kif20a LOC106563621 coding downstream 819 33011238 ~ 33019372 (-)
LOC118945287 NA coding downstream 62390 32954859 ~ 32957801 (-)
LOC118945341 NA coding downstream 103967 32905087 ~ 32916224 (-)
si:ch211-107p11.3 LOC106563619 coding downstream 175880 32842113 ~ 32844311 (-)
LOC110510097 LOC106563615 coding downstream 206594 32800580 ~ 32813597 (-)
LOC110510107 djc18 coding upstream 20682 33040945 ~ 33058157 (-)
ecscr LOC106563624 coding upstream 42188 33062451 ~ 33066498 (-)
ppp3ca UBE2D2 coding upstream 46642 33066905 ~ 33205175 (-)
zgc:100829 LOC106563646 coding upstream 306447 33326710 ~ 33390385 (-)
puraa LOC107684715 coding upstream 406356 33426619 ~ 33434693 (-)
G2176552 NA non-coding downstream 26323 32993625 ~ 32993868 (-)
G2176550 NA non-coding downstream 29220 32990750 ~ 32990971 (-)
G2176549 NA non-coding downstream 29483 32990421 ~ 32990708 (-)
G2176544 NA non-coding downstream 32941 32986973 ~ 32987250 (-)
G2176515 NA non-coding downstream 73018 32946747 ~ 32947173 (-)
G2176596 NA non-coding upstream 18681 33038944 ~ 33039150 (-)
G2176615 NA non-coding upstream 38506 33058769 ~ 33062428 (-)
G2176707 NA non-coding upstream 106284 33126547 ~ 33129922 (-)
G2176709 NA non-coding upstream 109796 33130059 ~ 33133784 (-)
G2176363 NA other downstream 375619 32643402 ~ 32644572 (-)
cpi1 cpi1 other downstream 586550 32395346 ~ 32433641 (-)
LOC110510065 LOC106603070 other downstream 734708 32282188 ~ 32287263 (-)
G2175969 LOC100194703 other downstream 754102 32263283 ~ 32266089 (-)
LOC110509376 LOC107567170 other downstream 1281956 31736713 ~ 31738259 (-)
G2177695 NA other upstream 491033 33511296 ~ 33512326 (-)
G2177991 cfb other upstream 1101219 34092047 ~ 34216247 (-)
LOC110510135 LOC106563696 other upstream 1318648 34338911 ~ 34342460 (-)
G2178372 NA other upstream 1782928 34792330 ~ 34809382 (-)
G2179862 NA other upstream 2941721 35961984 ~ 35962832 (-)

Expression



Co-expression Network