Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110510145 |
| gene name | rab1a |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048593.1 |
| NCBI id | CM023247.2 |
| chromosome length | 47748341 |
| location | 34516622 ~ 34521725 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| symbol | description |
|---|---|
| rab1a | Enables GTPase activity. Involved in several processes, including COPII-coated vesicle cargo loading; growth hormone secretion; and positive regulation of macromolecule metabolic process. Located in Golgi apparatus and extracellular exosome. |
| description |
|---|
| ras-related protein Rab-1A-like |
| id | name | namespace |
|---|---|---|
| GO:0007264 | small GTPase mediated signal transduction | biological_process |
| GO:0015031 | protein transport | biological_process |
| GO:0005525 | GTP binding | molecular_function |
| id | description |
|---|---|
| K07874 | RAB1A; Ras-related protein Rab-1A |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_021591496.2 | True | 1171 | mRNA | 0.48 | 7 | 34516622 | 34521725 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| ehbp1l1b | LOC100380650 | coding | upstream | 466 | 34478463 ~ 34516156 (+) |
| LOC110510143 | LOC106563691 | coding | upstream | 39289 | 34472567 ~ 34477333 (+) |
| znrd2 | ssa27 | coding | upstream | 44528 | 34469852 ~ 34472094 (+) |
| LOC110510140 | NA | coding | upstream | 54165 | 34456414 ~ 34462457 (+) |
| LOC110510141 | LOC106563694 | coding | upstream | 60991 | 34447839 ~ 34455631 (+) |
| cd248b | LOC106563689 | coding | downstream | 20095 | 34541820 ~ 34544760 (+) |
| LOC100136033 | LOC100136033 | coding | downstream | 60027 | 34581752 ~ 34586596 (+) |
| LOC110510150 | LOC106563687 | coding | downstream | 70096 | 34591821 ~ 34596053 (+) |
| slc7a3a | LOC106563685 | coding | downstream | 77101 | 34598826 ~ 34611290 (+) |
| LOC118945290 | NA | coding | downstream | 113519 | 34635244 ~ 34638008 (+) |
| G2177507 | NA | non-coding | upstream | 19847 | 34496305 ~ 34496775 (+) |
| G2177506 | NA | non-coding | upstream | 20753 | 34494614 ~ 34495869 (+) |
| G2177496 | NA | non-coding | upstream | 63972 | 34452173 ~ 34452650 (+) |
| G2177426 | NA | non-coding | upstream | 152202 | 34362522 ~ 34364420 (+) |
| G2177422 | NA | non-coding | upstream | 160159 | 34356240 ~ 34356463 (+) |
| G2177515 | NA | non-coding | downstream | 17545 | 34539270 ~ 34539757 (+) |
| G2177471 | NA | non-coding | downstream | 24347 | 34546072 ~ 34546586 (+) |
| G2177470 | LOC106563688 | non-coding | downstream | 30584 | 34552309 ~ 34565130 (+) |
| G2177476 | NA | non-coding | downstream | 58919 | 34580644 ~ 34581052 (+) |
| G2177518 | NA | non-coding | downstream | 91104 | 34612829 ~ 34614298 (+) |
| G2177424 | NA | other | upstream | 55853 | 34359624 ~ 34460769 (+) |
| LOC110510132 | rin1 | other | upstream | 284439 | 34227307 ~ 34236487 (+) |
| LOC110510125 | LOC106563697 | other | upstream | 381223 | 34105921 ~ 34135553 (+) |
| cxxc5a | LOC106563628 | other | upstream | 1281087 | 33212994 ~ 33235535 (+) |
| LOC110509425 | LOC106563572 | other | upstream | 2390544 | 32115629 ~ 32150579 (+) |
| LOC110510159 | LOC106563679 | other | downstream | 281214 | 34784319 ~ 34825545 (+) |
| ndufa2 | ndua2 | other | downstream | 984123 | 35505848 ~ 35507048 (+) |
| G2179418 | NA | other | downstream | 1329929 | 35851654 ~ 35856462 (+) |
| G2179454 | LOC106602907 | other | downstream | 1390765 | 35912490 ~ 35925031 (+) |
| G2180218 | LOC106563757 | other | downstream | 2156846 | 36678571 ~ 36680297 (+) |
