si:ch73-362m14.2 (LOC106563676)


Basic Information

Item Value
gene id si:ch73-362m14.2
gene name LOC106563676
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048593.1
NCBI id CM023247.2
chromosome length 47748341
location 34815706 ~ 34822942 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021591519.2
TGAAAGTTAGGGTCTGGTTTAGAAGTTACATTTGAGGAACATTTGGTCATATTGGTACGTGGGTGACAAGAGGGTTAGAGAGACAACTCACCATCTCATTGAGGATGCTGGTTTTGATCAGcatCCAACGAAGTCAGAGCAAGTAGCAGCCCACTTCCAATTGTCATGGCAACAGCATGTGAATGTATTGGGCTGTAGGAGCAGGCTGTAGCGTAGATGTAGGAGTGCTGCATTGGAAGCCACAGCTCTATCTCCTGAGCCAGCTgtgagGTAACATCCAGATGAAGGAATTGTGAAACTCTGTTCTCTAAAGAGGACTCATCTCTGCTCAGCCAAACAGCCTGTGATCTACCTGGTGTCTCAGGCCTGTCTCTGATGTCATGGAGAACAGGGCCCTGATGTGTACCAGTCAGGCCTGGAAGGGGCCCAAAGGGTCCACCTTCTCCCCCAACTGGGACAACACATCATACCAACCAAACATCATGATGTCCCCTTGTCCTGACGTGGTGAAGTCCCCATGCCAGCATGCTGCCAAGATATGCCACCCCCCAGAAGCCTCTGTGACCTCCCAGTTCCAGCAGGTTGGCCCCTATGCCTCCACTGGATTGTCTGCCATGGCTAACACTGCCAGTAGAAAGGGTGAAAGGGAGTGTTATATAGTTAACCCCATTCAAAATGAGGAGACGGTCCTGCCAGTACACAACCCTGAGTTTCGCGGTCGCTCCTTCTCTGCAGCCACTGCCTCAAACTCAATTACTTCCAGAAGCAGATGTGACAGCTACGTCCACCTATGCCCTGACAACAGCTCAGAGGACATTAGTAGAGGCGACAGCTCCCCGTTGAGCCCAGACGTCTCCCCTGATCACGGTGGTCCACGGTCGCGGTCCCACAGCATCATCCtgaggaagacgaggaggaggCCGGCGCCGCCAACCCGTAGCGTGTCCCTGAGGAGAGACTCCGCCTCCCAGCTCAGAGACAACAGGACCAAGAGCCTCTACATGGACAGTGACACAGCTACCCAAGACCCCTTCTTGCCTGACCTCATCCTCATCTCCACACCCAGGACAGAGGAGGTACTGTGCCTGGAGCAGTCCCCTGCTCAGCCTGTacaggctctggttgggccaccaGTCAACAATAATGGGCAGCTACGTGAAGTAAGATCTACTGACCCCTGCTCTTCCATGTCAAGCTCAGGTCCTGCTGTGGGTATTACTGGAAATGAGGACAAAAAAGCCACCAGCTGGTCAGAATCGGTCAGACCCTCTCCCCCCTTGCGACACCCTCCATCTCTAACTTGTAAACAGTCCCCCTTCCTACCACCTGCCCCAGTCTCCCCTTCCAATGGCAAGTCCAGATCTCAGTGTGAGACTTCCCCCCCTCCTATCCTCACGTCTGCCATCACTGGACCCTCCCCCCTGGGCTGCAGGATGCGCCCCAAgtcctccacttcacccaccTCCCCCAGAGCCAGCAACAGCAGGCTACGGCTGTCCCTGGAGTTGCCAGGGATTGTCCCTCTCCCAGACCCGACGTTGATCAAATCTAAAGCCACGCGGCGTCACTCCGAGTCCTCTGGCACTACCAAACCCAGACAGAGGCTGAGCTCCAGCATGATGGTGATGCCTGTGGTGACCCAGGAGGATCTCAGCAATGTTCGTTTACGTTCCGTCAGCAGCTCAGATTCAGACAAAGGCCTGGAGGGCTCACCTGAAGTCAtcagggaggaggagcaggaacaggagctGGAGCTGGAGAGCTGTCCATTGGTCCACTACAGTCCTAAAGCTAAACCACCTGTTGCTACTAAGCCACCCGCACACAAATGGCCACCAATACATATGGTAAAGTCCTCCTCAATCTCTACACAGTTCTCAGAGACCCTTCCAGCCTCACCAAGAGAGAGCCAAGAGGACATGTTTATGGTGGAAAGAAGAGTGAAGCCTAAGAGGTCACACCAGCCTCCTCGTGTTGCCAGTGATGGGGTTATGTTTCAGAGGCAGCAAGCTGTAGACAGGCAGCAGTATGATGTGACTGACTCACACCCACCACCTGCCTCCTGCTATTCAGAGACCAGGAATGTGAGAAGGACCTCTCTCACCAGCACCACATCTCTTCAAGCTGAACTAGATAGGAAGAAGAAGTTGGTTCCCCCTCCAGTTGCAAAGAAACCTGATGTCCTCTTCATGCCCTCCATCAGCTCACTGGGACAGGAGAGCACCAGGAGCCATGTCTGGTCTGGGCTCAGTGGTGCTTACCAGGCTCCTGCCAGTGCATACCAGCCTCATACCACTGGTTACCAGGTTACTGCCAGTGGTTACCAGGTTACTGCCAGTgtttacagagacagagactttACTGGACAAGATTGCAACCATAACAGGATAAGAGATGGATTTTTCCTAGATGAGAAcagtgaagagaggagagcaaTGCCTCAGATGAGAACACTGTGCCTcggggagcaggaggaggaagagttggACCACAACTCCTCACAGCCAACTACTGAGGACCTATTCACCATCATACACAGGTCAAAGAAGAAACTCCTGGGTCGTAAAGAAACAGCTGACAGCACTGGGAGCAGGCAGGGTTACGGATCCCCCATTAAAGGCACCCCGAGGGTCGTCCAGAAGTCAAGCTCCAAAAATGACAACTTCATGGCTTTTctgcagaggaggaggagcaatAAACCCAGCTCTGGGGAGAGACTGTCAGCCTCTGAACTACTGAAGAATACTAAACCATTGGCCGGCCAACCGTAGCGCATCAAACAACTCCAATGTTTATGTTTCTCAATGTGTAACAAACACTTTTCACTCAATATGTGGCATGCGAGTATTGTGGACAATCAGGGAGAGAAGGAAAAGGCTATAGTTTGTATTGCTTTACGTGCTACAGTACACCGGCAGCTTATTTCTGTGACGGCAATACAGTGTATAGAGGTCATGTCTAACTGGAAATATGACAGTGTTGGCCAGCTGTGTTTTGCTTATGAGCTGAGACAATCTATCGTGTCAATACATCTTTCTTGCCTTGACTTGTGATGCCTACAACATTTGTTTTTGAGCTGCCAACATTTGTGCTTTTGGTCATGTATCGCTCAGAAATTAAACAGAGCTGCTTGTGTG
>XM_021591520.2
TGAAAGTTAGGGTCTGGTTTAGAAGTTACATTTGAGGAACATTTGGTCATATTGGTACGTGGGTGACAAGAGGGTTAGAGAGACAACTCACCATCTCATTGAGGATGCTGGTTTTGATCAGcatCCAACGAAGTCAGAGCAAGTAGCAGCCCACTTCCAATTGTCATGGCAACAGCATGTGAATGTATTGGGCTGTAGGAGCAGGCTGTAGCGTAGATGTAGGAGTGCTGCATTGGAAGCCACAGCTCTATCTCCTGAGCCAGCTgtgaggtaggaggggaggacaCAGAGCTTTGGAGGGATTTATGGACACATTCATCAGGCTCTGTTTTACAGGAAGGTAACATCCAGATGAAGGAATTGTGAAACTCTGTTCTCTAAAGAGGACTCATCTCTGCTCAGCCAAACAGCCTGTGATCTACCTGGTGTCTCAGGCCTGTCTCTGATGTCATGGAGAACAGGGCCCTGATGTGTACCAGTCAGGCCTGGAAGGGGCCCAAAGGGTCCACCTTCTCCCCCAACTGGGACAACACATCATACCAACCAAACATCATGATGTCCCCTTGTCCTGACGTGGTGAAGTCCCCATGCCAGCATGCTGCCAAGATATGCCACCCCCCAGAAGCCTCTGTGACCTCCCAGTTCCAGCAGGTTGGCCCCTATGCCTCCACTGGATTGTCTGCCATGGCTAACACTGCCAGTAGAAAGGGTGAAAGGGAGTGTTATATAGTTAACCCCATTCAAAATGAGGAGACGGTCCTGCCAGTACACAACCCTGAGTTTCGCGGTCGCTCCTTCTCTGCAGCCACTGCCTCAAACTCAATTACTTCCAGAAGCAGATGTGACAGCTACGTCCACCTATGCCCTGACAACAGCTCAGAGGACATTAGTAGAGGCGACAGCTCCCCGTTGAGCCCAGACGTCTCCCCTGATCACGGTGGTCCACGGTCGCGGTCCCACAGCATCATCCtgaggaagacgaggaggaggCCGGCGCCGCCAACCCGTAGCGTGTCCCTGAGGAGAGACTCCGCCTCCCAGCTCAGAGACAACAGGACCAAGAGCCTCTACATGGACAGTGACACAGCTACCCAAGACCCCTTCTTGCCTGACCTCATCCTCATCTCCACACCCAGGACAGAGGAGGTACTGTGCCTGGAGCAGTCCCCTGCTCAGCCTGTacaggctctggttgggccaccaGTCAACAATAATGGGCAGCTACGTGAAGTAAGATCTACTGACCCCTGCTCTTCCATGTCAAGCTCAGGTCCTGCTGTGGGTATTACTGGAAATGAGGACAAAAAAGCCACCAGCTGGTCAGAATCGGTCAGACCCTCTCCCCCCTTGCGACACCCTCCATCTCTAACTTGTAAACAGTCCCCCTTCCTACCACCTGCCCCAGTCTCCCCTTCCAATGGCAAGTCCAGATCTCAGTGTGAGACTTCCCCCCCTCCTATCCTCACGTCTGCCATCACTGGACCCTCCCCCCTGGGCTGCAGGATGCGCCCCAAgtcctccacttcacccaccTCCCCCAGAGCCAGCAACAGCAGGCTACGGCTGTCCCTGGAGTTGCCAGGGATTGTCCCTCTCCCAGACCCGACGTTGATCAAATCTAAAGCCACGCGGCGTCACTCCGAGTCCTCTGGCACTACCAAACCCAGACAGAGGCTGAGCTCCAGCATGATGGTGATGCCTGTGGTGACCCAGGAGGATCTCAGCAATGTTCGTTTACGTTCCGTCAGCAGCTCAGATTCAGACAAAGGCCTGGAGGGCTCACCTGAAGTCAtcagggaggaggagcaggaacaggagctGGAGCTGGAGAGCTGTCCATTGGTCCACTACAGTCCTAAAGCTAAACCACCTGTTGCTACTAAGCCACCCGCACACAAATGGCCACCAATACATATGGTAAAGTCCTCCTCAATCTCTACACAGTTCTCAGAGACCCTTCCAGCCTCACCAAGAGAGAGCCAAGAGGACATGTTTATGGTGGAAAGAAGAGTGAAGCCTAAGAGGTCACACCAGCCTCCTCGTGTTGCCAGTGATGGGGTTATGTTTCAGAGGCAGCAAGCTGTAGACAGGCAGCAGTATGATGTGACTGACTCACACCCACCACCTGCCTCCTGCTATTCAGAGACCAGGAATGTGAGAAGGACCTCTCTCACCAGCACCACATCTCTTCAAGCTGAACTAGATAGGAAGAAGAAGTTGGTTCCCCCTCCAGTTGCAAAGAAACCTGATGTCCTCTTCATGCCCTCCATCAGCTCACTGGGACAGGAGAGCACCAGGAGCCATGTCTGGTCTGGGCTCAGTGGTGCTTACCAGGCTCCTGCCAGTGCATACCAGCCTCATACCACTGGTTACCAGGTTACTGCCAGTGGTTACCAGGTTACTGCCAGTgtttacagagacagagactttACTGGACAAGATTGCAACCATAACAGGATAAGAGATGGATTTTTCCTAGATGAGAAcagtgaagagaggagagcaaTGCCTCAGATGAGAACACTGTGCCTcggggagcaggaggaggaagagttggACCACAACTCCTCACAGCCAACTACTGAGGACCTATTCACCATCATACACAGGTCAAAGAAGAAACTCCTGGGTCGTAAAGAAACAGCTGACAGCACTGGGAGCAGGCAGGGTTACGGATCCCCCATTAAAGGCACCCCGAGGGTCGTCCAGAAGTCAAGCTCCAAAAATGACAACTTCATGGCTTTTctgcagaggaggaggagcaatAAACCCAGCTCTGGGGAGAGACTGTCAGCCTCTGAACTACTGAAGAATACTAAACCATTGGCCGGCCAACCGTAGCGCATCAAACAACTCCAATGTTTATGTTTCTCAATGTGTAACAAACACTTTTCACTCAATATGTGGCATGCGAGTATTGTGGACAATCAGGGAGAGAAGGAAAAGGCTATAGTTTGTATTGCTTTACGTGCTACAGTACACCGGCAGCTTATTTCTGTGACGGCAATACAGTGTATAGAGGTCATGTCTAACTGGAAATATGACAGTGTTGGCCAGCTGTGTTTTGCTTATGAGCTGAGACAATCTATCGTGTCAATACATCTTTCTTGCCTTGACTTGTGATGCCTACAACATTTGTTTTTGAGCTGCCAACATTTGTGCTTTTGGTCATGTATCGCTCAGAAATTAAACAGAGCTGCTTGTGTG
>XM_021591523.2
TAGAAGTTACATTTGAGGAACATTTGGTCATATTGGTACGTGGGTGACAAGAGGGTTAGAGAGACAACTCACCATCTCATTGAGGATGCTGGTTTTGATCAGGTAACATCCAGATGAAGGAATTGTGAAACTCTGTTCTCTAAAGAGGACTCATCTCTGCTCAGCCAAACAGCCTGTGATCTACCTGGTGTCTCAGGCCTGTCTCTGATGTCATGGAGAACAGGGCCCTGATGTGTACCAGTCAGGCCTGGAAGGGGCCCAAAGGGTCCACCTTCTCCCCCAACTGGGACAACACATCATACCAACCAAACATCATGATGTCCCCTTGTCCTGACGTGGTGAAGTCCCCATGCCAGCATGCTGCCAAGATATGCCACCCCCCAGAAGCCTCTGTGACCTCCCAGTTCCAGCAGGTTGGCCCCTATGCCTCCACTGGATTGTCTGCCATGGCTAACACTGCCAGTAGAAAGGGTGAAAGGGAGTGTTATATAGTTAACCCCATTCAAAATGAGGAGACGGTCCTGCCAGTACACAACCCTGAGTTTCGCGGTCGCTCCTTCTCTGCAGCCACTGCCTCAAACTCAATTACTTCCAGAAGCAGATGTGACAGCTACGTCCACCTATGCCCTGACAACAGCTCAGAGGACATTAGTAGAGGCGACAGCTCCCCGTTGAGCCCAGACGTCTCCCCTGATCACGGTGGTCCACGGTCGCGGTCCCACAGCATCATCCtgaggaagacgaggaggaggCCGGCGCCGCCAACCCGTAGCGTGTCCCTGAGGAGAGACTCCGCCTCCCAGCTCAGAGACAACAGGACCAAGAGCCTCTACATGGACAGTGACACAGCTACCCAAGACCCCTTCTTGCCTGACCTCATCCTCATCTCCACACCCAGGACAGAGGAGGTACTGTGCCTGGAGCAGTCCCCTGCTCAGCCTGTacaggctctggttgggccaccaGTCAACAATAATGGGCAGCTACGTGAAGTAAGATCTACTGACCCCTGCTCTTCCATGTCAAGCTCAGGTCCTGCTGTGGGTATTACTGGAAATGAGGACAAAAAAGCCACCAGCTGGTCAGAATCGGTCAGACCCTCTCCCCCCTTGCGACACCCTCCATCTCTAACTTGTAAACAGTCCCCCTTCCTACCACCTGCCCCAGTCTCCCCTTCCAATGGCAAGTCCAGATCTCAGTGTGAGACTTCCCCCCCTCCTATCCTCACGTCTGCCATCACTGGACCCTCCCCCCTGGGCTGCAGGATGCGCCCCAAgtcctccacttcacccaccTCCCCCAGAGCCAGCAACAGCAGGCTACGGCTGTCCCTGGAGTTGCCAGGGATTGTCCCTCTCCCAGACCCGACGTTGATCAAATCTAAAGCCACGCGGCGTCACTCCGAGTCCTCTGGCACTACCAAACCCAGACAGAGGCTGAGCTCCAGCATGATGGTGATGCCTGTGGTGACCCAGGAGGATCTCAGCAATGTTCGTTTACGTTCCGTCAGCAGCTCAGATTCAGACAAAGGCCTGGAGGGCTCACCTGAAGTCAtcagggaggaggagcaggaacaggagctGGAGCTGGAGAGCTGTCCATTGGTCCACTACAGTCCTAAAGCTAAACCACCTGTTGCTACTAAGCCACCCGCACACAAATGGCCACCAATACATATGGTAAAGTCCTCCTCAATCTCTACACAGTTCTCAGAGACCCTTCCAGCCTCACCAAGAGAGAGCCAAGAGGACATGTTTATGGTGGAAAGAAGAGTGAAGCCTAAGAGGTCACACCAGCCTCCTCGTGTTGCCAGTGATGGGGTTATGTTTCAGAGGCAGCAAGCTGTAGACAGGCAGCAGTATGATGTGACTGACTCACACCCACCACCTGCCTCCTGCTATTCAGAGACCAGGAATGTGAGAAGGACCTCTCTCACCAGCACCACATCTCTTCAAGCTGAACTAGATAGGAAGAAGAAGTTGGTTCCCCCTCCAGTTGCAAAGAAACCTGATGTCCTCTTCATGCCCTCCATCAGCTCACTGGGACAGGAGAGCACCAGGAGCCATGTCTGGTCTGGGCTCAGTGGTGCTTACCAGGCTCCTGCCAGTGCATACCAGCCTCATACCACTGGTTACCAGGTTACTGCCAGTGGTTACCAGGTTACTGCCAGTgtttacagagacagagactttACTGGACAAGATTGCAACCATAACAGGATAAGAGATGGATTTTTCCTAGATGAGAAcagtgaagagaggagagcaaTGCCTCAGATGAGAACACTGTGCCTcggggagcaggaggaggaagagttggACCACAACTCCTCACAGCCAACTACTGAGGACCTATTCACCATCATACACAGGTCAAAGAAGAAACTCCTGGGTCGTAAAGAAACAGCTGACAGCACTGGGAGCAGGCAGGGTTACGGATCCCCCATTAAAGGCACCCCGAGGGTCGTCCAGAAGTCAAGCTCCAAAAATGACAACTTCATGGCTTTTctgcagaggaggaggagcaatAAACCCAGCTCTGGGGAGAGACTGTCAGCCTCTGAACTACTGAAGAATACTAAACCATTGGCCGGCCAACCGTAGCGCATCAAACAACTCCAATGTTTATGTTTCTCAATGTGTAACAAACACTTTTCACTCAATATGTGGCATGCGAGTATTGTGGACAATCAGGGAGAGAAGGAAAAGGCTATAGTTTGTATTGCTTTACGTGCTACAGTACACCGGCAGCTTATTTCTGTGACGGCAATACAGTGTATAGAGGTCATGTCTAACTGGAAATATGACAGTGTTGGCCAGCTGTGTTTTGCTTATGAGCTGAGACAATCTATCGTGTCAATACATCTTTCTTGCCTTGACTTGTGATGCCTACAACATTTGTTTTTGAGCTGCCAACATTTGTGCTTTTGGTCATGTATCGCTCAGAAATTAAACAGAGCTGCTTGTGTG

Function

NR:

description
NHS-like protein 2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021591519.2 False 3137 mRNA 0.52 5 34815706 34822942
XM_021591520.2 False 3207 mRNA 0.52 5 34815706 34822942
XM_021591523.2 True 2969 mRNA 0.52 4 34815725 34822942

Neighbor

gene id symbol gene type direction distance location
LOC110510159 LOC106563679 coding upstream 11765 34784319 ~ 34825545 (+)
LOC110510158 LOC106563717 coding upstream 32848 34763682 ~ 34782858 (+)
LOC110510157 LOC106563680 coding upstream 54548 34748870 ~ 34761158 (+)
LOC110510155 LOC106563682 coding upstream 100160 34703325 ~ 34715546 (+)
LOC110510153 LOC106563683 coding upstream 154457 34638233 ~ 34661249 (+)
LOC110510163 LOC106563675 coding downstream 3302 34826244 ~ 34844491 (+)
LOC110510164 LOC106563716 coding downstream 23509 34846451 ~ 34850826 (+)
LOC110510166 LOC106563673 coding downstream 41164 34864106 ~ 34869495 (+)
cx04a cx04a coding downstream 47016 34869958 ~ 34870902 (+)
LOC110510168 LOC106602948 coding downstream 49773 34872715 ~ 34876341 (+)
G2177629 LOC106563678 non-coding upstream 1848 34809893 ~ 34813858 (+)
G2177562 NA non-coding upstream 7017 34792337 ~ 34808689 (+)
G2177621 NA non-coding upstream 36730 34778727 ~ 34778976 (+)
G2177618 NA non-coding upstream 39084 34776392 ~ 34776622 (+)
G2177636 NA non-coding downstream 28306 34851248 ~ 34852129 (+)
G2177565 NA non-coding downstream 59445 34882387 ~ 34883032 (+)
LOC110510169 NA non-coding downstream 64741 34887683 ~ 34895727 (+)
G2178457 NA non-coding downstream 73257 34896199 ~ 34896628 (+)
G2178461 NA non-coding downstream 76090 34899032 ~ 34899275 (+)
G2177424 NA other upstream 354937 34359624 ~ 34460769 (+)
LOC110510132 rin1 other upstream 583523 34227307 ~ 34236487 (+)
LOC110510125 LOC106563697 other upstream 680307 34105921 ~ 34135553 (+)
cxxc5a LOC106563628 other upstream 1580171 33212994 ~ 33235535 (+)
LOC110509425 LOC106563572 other upstream 2689628 32115629 ~ 32150579 (+)
ndufa2 ndua2 other downstream 682906 35505848 ~ 35507048 (+)
G2179418 NA other downstream 1028712 35851654 ~ 35856462 (+)
G2179454 LOC106602907 other downstream 1089548 35912490 ~ 35925031 (+)
G2180218 LOC106563757 other downstream 1855629 36678571 ~ 36680297 (+)
G2180378 NA other downstream 2159404 36982346 ~ 36982614 (+)

Expression

si:ch73-362m14.2(LOC106563676) Expression in all Baseline Samples

Bar chart with 20 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 5.
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si:ch73-362m14.2(LOC106563676) Expression in each Bioproject

Bar chart with 21 bars.
si:ch73-362m14.2(LOC106563676) Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 150.
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Co-expression Network