LOC118945291


Basic Information

Item Value
gene id LOC118945291
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048593.1
NCBI id CM023247.2
chromosome length 47748341
location 35349365 ~ 35368562 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036967716.1
atgggtatggtggggtgcgggtacagtggggGTAAGCCCAGGAAccgagtgatgataagagagttCGCATCTCTGGACGTGCTGGTTatactgggtgaggtcaccgcatgtgtgggagtcctctctgcagCCCCAGACCTCTCTGAGCCCCCAGACCTCTCTGTGCCCCCAGTCCACACTGAGCCCCCAGTCCACTCTGAGCCCCCAGTAAACTCTGCACCCCCAGTCCACTCTAAGCACCCAGACCTCTCTGTGCCCCCAGTCCACACTGAGCCCCCAGACCACTCTgagcccccagtcctctctgcacccccagtCCACTCTGCACCCCCAGTCCACTCTGCGCCCCCAGTCTTCCCTgagcccccagtcctctctgcgcCCCTAGTCTTCCCTGAGCCCCCAGTCCTCTCCgcacccccagtcctctctgagCCCCTAGTCCTCTCTgtgcccccagtcctctctTCCACTCTGTGCCCCCAGTCCACTCTGAGCCCCCAGTCCACTCTGAGCCCCCAGTCCACTCTGAGCCCCCAGTCCACTCTGAGCCCCAGACCTCTCtgcaccccctTCCACTCTGCGCCCCCAGTCTTCCCTGAGACCCAAGTCCTCTCCGCACCCCCAGTCTTCCCTGATTCCCCAGACCTCTCGTCCACTCTGTGCCCCCAGTCCACTCTGAGCCCCCAGTCCACTCTGAGCCCCCAGTCCACTCTGAGCCCCAGACCTCTCtgcacccccttcctctctgcgcCCCCAGTCCACTCTGCGCCCCCAGTCTTCCCTGAGACCCAAGTCCTCTCCGCACCCCCAGTCTTCCCTGATTCCCCAGACCTCTCGtcctctctgcgcCCCCAGTCCACTCTGCGCCCCCAGTCTTCCCTGAGACCCAAGTCCTCTCCGCACCCCCAGTCTTCCCTGATTCCCCAGACCTCTCGacctctctgcGCCCCAGTTCTCTCTGCACCCCCAGTCCACTCTGCGCCCCCAGTCTTCCCTGAGCCCCAAGTCCTCTCCGCACCCCCAGTCTTCCCTGAttccccagtcctctctgtgCCCCCAGTCCACTCTGCACCCCCAGTCTTCCCTgagcccccagtcctctctgagcccccagtcctctctgcgcCCCTAGCCCTCTCCGCACCCCCAGTCTTCCCTGAGCCCCCAGTCCTCTCCGCACCCCCAGTCTTCCCTGAGCCCCCAGTCTTCCCTGAGCCCCCAGTCCACTCTGCGCCCCCAGTCTTCCCTGAGCCCCCAGTCCACTCTGCGCCCCCAGTCTTCCCTGAGCCCCCAGTCCACTCTGCGCCCCCAGTCTTCCTTGAGCCCCCAGTCCTCTCAGAGCCCCCAGTCCTCTCCGCACCCCCAGTCTTCCCTGAttccccagtcctctctgtgCCCCCAGTCCACTCTGCACCCCCAGTCTTCCCTgagcccccagtcctctctgagcccccagtcctctctgcgcCCCTAGCCCTCTCCGCACCCCCAtcctctctgcgcCCCCAGTCCACTCTGCGCCCCCAGTCTTCCCTGAGACCCAAGTCCTCTCCGCACCCCCAGTCTTCCCTGATTCCCCAGACCTCTCGGGacctctctgAGCCCCCAGACCTCTCTGTGCCCCCAGTCCACACTGAGCCCCCAGTCCACTCTgagcccccagtcctctctgcacccccagtcctctctgcgcCCCCAGTCCACTCTGCGCCCCCAGTCTTCCCTGAGCCCCAAGTCCTCTCCGCACCCCCAGTCTTCCCTGAttccccagtcctctctCCCTCTCCGCACCCCCAGTCTTCCCTGAGCCCCCAGTCCTCTCCGCACCCCCAGTCTTCCCTGAGCCCCCAGTCTTCCCTGAGCCCCCAGTCCACTCTGCGCCCCCAGTCTTCCCTGAGCCCCCAGTCCACTCTGCGCCCCCAGTCTTCCCTGAGCCCCCAGTCCACTCTGCGCCCCCAGTCTTCCTTGAGCCCCCAGTCCTCTCAGAGCCCCCAGTCCTCTCAgagcccccagtcctctctgtgcCCCCAGTCCTCTCAGAGCCCCCAGTCCACTCTTcgcccccagtcctctctgcgcCCCCAGTCCTCTCAGTGCCCCCAGTCCTCTCAgagcccccagtcctctctgagCCCCCAGTCCTCTCAGAGCCCCCAGTCCTCTCGGTGCCCCCAGTCCTCTCAgagcccccagtcctctctgagCCCCCCAGTCCACTCTgcacccccagtcctctcttcctctctgcaccTCCAGACCTCTCTGCAACCCCAgacctctctgcacccccagacctctctgcACCCCAGACCTCTCTGa

Function

NR:

description
PREDICTED: uncharacterized protein LOC108268490

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036967716.1 True 2322 mRNA 0.66 12 35349365 35368562
Loading

Neighbor

gene id symbol gene type direction distance location
LOC110510172 dach2 coding downstream 59827 35003916 ~ 35289538 (-)
LOC110510171 NA coding downstream 369700 34965129 ~ 34979665 (-)
LOC110510165 atg4a coding downstream 486862 34851196 ~ 34862503 (-)
LOC110510161 LOC106563678 coding downstream 534426 34809871 ~ 34814939 (-)
LOC110510156 LOC106563681 coding downstream 622133 34715939 ~ 34727232 (-)
LOC110510176 LOC106563749 coding upstream 30774 35399336 ~ 35421812 (-)
LOC110510173 LOC106563748 coding upstream 53404 35421966 ~ 35454525 (-)
ik ik coding upstream 126723 35495285 ~ 35505716 (-)
LOC110510180 tcof coding upstream 138485 35507047 ~ 35524067 (-)
LOC110510228 LOC106563789 coding upstream 437901 35804621 ~ 35817492 (-)
G2179150 NA non-coding downstream 2833 35346220 ~ 35346532 (-)
G2179137 NA non-coding downstream 26994 35321958 ~ 35322371 (-)
G2178878 NA non-coding downstream 56714 35292427 ~ 35292651 (-)
G2178832 NA non-coding downstream 118674 35230456 ~ 35230691 (-)
G2178783 NA non-coding downstream 146435 35164892 ~ 35202930 (-)
G2179158 NA non-coding upstream 129 35368691 ~ 35368982 (-)
G2179162 NA non-coding upstream 5964 35374526 ~ 35375017 (-)
G2179167 NA non-coding upstream 18925 35387487 ~ 35387735 (-)
G2179169 NA non-coding upstream 20053 35388615 ~ 35389248 (-)
G2179178 s226a non-coding upstream 34878 35403440 ~ 35468274 (-)
G2178372 NA other downstream 540062 34792330 ~ 34809382 (-)
LOC110510135 LOC106563696 other downstream 1007552 34338911 ~ 34342460 (-)
G2177991 cfb other downstream 1202046 34092047 ~ 34216247 (-)
G2177695 NA other downstream 1837039 33511296 ~ 33512326 (-)
G2176363 NA other downstream 2704793 32643402 ~ 32644572 (-)
G2179862 NA other upstream 593422 35961984 ~ 35962832 (-)
LOC110510209 LOC106563761 other upstream 1135911 36499597 ~ 36596534 (-)
G2180120 NA other upstream 1137978 36506540 ~ 36507120 (-)
LOC110509384 NA other upstream 1608592 36975909 ~ 36979761 (-)
G2180587 NA other upstream 1613395 36981957 ~ 36982709 (-)

Expression

LOC118945291 Expression in all Baseline Samples

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LOC118945291 Expression in each Bioproject

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LOC118945291 Expression in each Sample
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Co-expression Network