LOC110510176 (LOC106563749)


Basic Information

Item Value
gene id LOC110510176
gene name LOC106563749
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048593.1
NCBI id CM023247.2
chromosome length 47748341
location 35399336 ~ 35421812 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021591545.2
CTCCACCCAACTGCTGATAACTTCAGCCAGCCACATCAACGCAGGTCTGACTCTGACAAGTCGTCGACTGCTCTGCCTTTGGGAGTGCATTTGTACTCGCTAAATCCACAGATGAATAGCCTGTCGTAACATCTAAGACATTGCTTTACAActattaattatatatttttaacatCTAGATCGATTGTTATCATGGAACGAAATAGTCGCCTGTTGTTTTGAAGTAGCTAGCTACGACGACTTAATAGCAGCTAGCTCGCTAGCTAAGTCAAGATACTGGTAACTAGCTCCTATCTGAGGTTACGTTGTTTTTCTAAAGGAAAAAAGGTTGCTACGTCTAACTAGCGAATAACAAAAAGCAAACTACGTTAACTAGCtagtctagctagctaaaacTATTATTTAATTGGTTGGCTTTCTGTTCCTTTGGATGCGGAAGATGGCCCAGTCACCGGGTGCGGTGCAAGTGCCTGGGATGCAGAACAGCCGGACGGACCCTGAGGAGCTGTTCACCAAGCTGGAGCGTATTGGGAAGGGCTCCTTTGGCGAGGTGTTCAAGGGCATCGACAACCGCACCCAGAAAGTGGTGGCCATCAAGACCATAGACCTGGAGGAAGCTGAGGATGAGATGGAGGACATCCAGCAGGAGATCACCGTGCTCAGCCAGTGTGACAGCCCCTACGTCACCAAGTACTACGGCTCCTACCTCAAGGGCAGTAAACTATGGATCATTATGGAGTACCTTGGTGGTGGCTCAGCTCTGGACCTGcTGCGAGCAGGGCCCTTTGATGAGTTCCAGATTGCCACCATGCTGAAGGAGATCTTGAAGGGCCTGGACTACCTCCACTCCGAGAGGAAGATCCACAGAGATATCAAAGCGGCCAACGTTCTTCTGTCAGAGTGTGGCGAGGTGAAACTGGCAGACTTTGGCGTGGCGGGCCAGCTGACAGACACCCAGATCAAGCGGGAGACGTTTGTGGGAACGCCCTTCTGGATGGCCCCCGAGGTCATCCAACAGTCTGCCTACGACCACAAGGCTGATATCTGGTCTCTGGGCATCACTGCCATCGAGCTGGCCAAGGGTGAGCCTCCCAACTCAGACATGCACCCTATGCGGGTCCTCTTCCTCATACCAAAGAACACCCCACCCACACTCAGTGGAGATTTCTCCAAGACCTTCAAAGACTTTATAGACTCCTGCCTCAACAAAGACCCTTCATTTAGGCCAACAGCTAAGGAGCTTCTGAAGCACAAGTTCATAGTGAAGAATGCCAAGAGGACGTCCTACCTCACTGAGCTGATAGACCGGTTGAAACGCTGGAAGGCCGAGGGACACAGTGATGGAGACTCCAGCTCTGATGACTCTGACTCGGAGTCCAGTAACAAGGAGAACAACTCCTCCCAGCCAGGCTGGTCCTTTACTACAGTTCGCAAGAAGAAAGACCCTAAGAAGGTTTCCAATGGAACGGACCAAGACCTCCTGAAGAAATCTACCAGCTTGACCACGCTGATTGCCCCAGTATTCACTGAGCTGAAGCTGCAgcgcagggatggagagatgaagggagtgaTGGAGGACTTGGAGAAAAGCATCCACCTGGCTGAGGACATCTGCCCCGGAGTCACAGACAAGATGGTCAACCGCATCGTCGACAAGTTCCAGAGATTGTCTGTCAGTTAGTGGCATGTGGAGGGCAGGTTTAGACGCTTGATGAGGACCACGCCTCCAGAGTGCATCATCAGCCTCTATGCCTTTTCCCATCATCCCCCATTCCTTTTCCCATCATCCCCCATGCCTCTCCTCTGATCAGCTCCCCCAGGACCAATGGAtgcagggaaagagggaggactCCTGCTGTGCACACTCACTGATCTTATAACCAAAaggatattttttaaatgtatttgttgaatatgttttgtttttctattttatttaatCCCTTTAAAAGTAGGCTCAAGCTAGTGCCCAAAGCAGAGCCTGTTACTGTTATGGTAGTCAATAGTATTTTAGTTTTGTAATATTTTCAGTctgagacaacaacaaaaaactctaAGGTTGCAACATCAATCTTCTGCTGAGTATAAGACATAGCTACTTAAAGATATTTCAATTTTGAATTAATTTTTTACTGCTACTAAAAATGTTTAAGTAGCTATATTTTAGATGTTCAGTGTACTGCACTTGTTTCTGATGTCTAGCTTACCATCTTCATGTCACTTGTAGCATTTAGAAACCTGCTGTTTGGAGAACTGCATATCTAGTCAAACCACAGGAGTTCAGTACCTCTCTGCTGAGAGCAAGCCATGGTTGAGGAAAGACTCAGACCCAGTGAATGTCCATAGAAACAAAACTTCTGTTTGTGACCATTTGGAAACGGGTCACTTGTTTGGGCATTGGGGAAAGATTGTATAGGAAATGGGTGGAGGACTTTGCTGCGCAAAAATGTATCACACCCTCTCATTCCAAAAGATACAAATCATATCTATCTTATGGGATCTTAGCTCTGTAAGGGGCAATCCTATTGGAACCTTCGGAGATCTGCTTCTGAAGGAAATATGCACTGCACACACTTTGAAGGGGGTGGAGCTTTTTCTAAATATACTTGCTAGTTATTTCCCTGTTTCAGACTAGATCTCATGGGAGACGGGGTACTTTTCTGTCTTAAAGACAATATACTCTCCCTCTACCAAAAAATACTTGAGTGCTCAAGTGAAATGGCAATGTCGGTATTGTGGACGTGTAATGTTTGAAACATTGGTATGAGTCCTTGAGTACTCTCTCTACTGGGGAGTCGTGTATCTTTGAACAAATCCCAAATAAAGACTTTTATTGGGAATTTTATCAGCCAAGCTCAAATGCATACAAAAGGGTGCCATCTTTGGTGTGGTGATGACACTGCACCTTTTGGAGGAAGTATGCCAACTTAACATCCAACAGTGCCTAAAACTTAAGAATTGCAGTGATATTCTCTATTTAAACTTAAGAATTGCAGTGATATTCTCTATTTAATTGTGGTCATGTATCATCAAATGCATTAAATGGTAATAATACATTTTGCCAGAGTGTTTCAAGTTTTTAAAAGCAATAAGGTATTTGATCATTGCATATTTTTATATTTCCTCAAATGACATTCAGATGGCAAAACTacgattttttttgtttatagaTTTCTGTATCTGAACTTTATAATGGAAACCGTGTTGACTTAGCTTTACAGGAAGCTGTCAAATGTACATATTGGATAGTCTTTGCTTCAATCGTTATTCATTTTGGTTTGGTcttgaaaaataaatatttaaattaTGAA
>XM_021591544.2
GGCTCCACCCAACTGCTGATAACTTCAGCCAGCCACATCAACGCAGGTCTGACTCTGACAAGTCGTCGACTGCTCTGCCTTTGGGAGTGCATTTGTACTCGCTAAATCCACAGATGAATAGCCTGTCGTAACATCTAAGACATTGCTTTACAActattaattatatatttttaacatCTAGATCGATTGTTATCATGGAACGAAATAGTCGCCTGTTGTTTTGAAGTAGCTAGCTACGACGACTTAATAGCAGCTAGCTCGCTAGCTAAGTCAAGATACTGGTAACTAGCTCCTATCTGAGGTTACGTTGTTTTTCTAAAGGAAAAAAGGTTGCTACGTCTAACTAGCGAATAACAAAAAGCAAACTACGTTAACTAGCtagtctagctagctaaaacTATTATTTAATTGGTTGGCTTTCTGTTCCTTTGGATGCGGAAGATGGCCCAGTCACCGGGTGCGGTGCAAGTGCCTGGGATGCAGAACAGCCGGACGGACCCTGAGGAGCTGTTCACCAAGCTGGAGCGTATTGGGAAGGGCTCCTTTGGCGAGGTGTTCAAGGGCATCGACAACCGCACCCAGAAAGTGGTGGCCATCAAGACCATAGACCTGGAGGAAGCTGAGGATGAGATGGAGGACATCCAGCAGGAGATCACCGTGCTCAGCCAGTGTGACAGCCCCTACGTCACCAAGTACTACGGCTCCTACCTCAAGGGCAGTAAACTATGGATCATTATGGAGTACCTTGGTGGTGGCTCAGCTCTGGACCTGcTGCGAGCAGGGCCCTTTGATGAGTTCCAGATTGCCACCATGCTGAAGGAGATCTTGAAGGGCCTGGACTACCTCCACTCCGAGAGGAAGATCCACAGAGATATCAAAGCGGCCAACGTTCTTCTGTCAGAGTGTGGCGAGGTGAAACTGGCAGACTTTGGCGTGGCGGGCCAGCTGACAGACACCCAGATCAAGCGGGAGACGTTTGTGGGAACGCCCTTCTGGATGGCCCCCGAGGTCATCCAACAGTCTGCCTACGACCACAAGGCTGATATCTGGTCTCTGGGCATCACTGCCATCGAGCTGGCCAAGGGTGAGCCTCCCAACTCAGACATGCACCCTATGCGGGTCCTCTTCCTCATACCAAAGAACACCCCACCCACACTCAGTGGAGATTTCTCCAAGACCTTCAAAGACTTTATAGACTCCTGCCTCAACAAAGACCCTTCATTTAGGCCAACAGCTAAGGAGCTTCTGAAGCACAAGTTCATAGTGAAGAATGCCAAGAGGACGTCCTACCTCACTGAGCTGATAGACCGGTTGAAACGCTGGAAGGCCGAGGGACACAGTGATGGAGACTCCAGCTCTGATGACTCTGACTCGGAGTCCAGTAACAAGGAGAACAACTCCTCCCAGCCAGGCTGGTCCTTTACTACAGTTCGCAAGAAGAAAGACCCTAAGAAGGTTTCCAATGGAACGGACCAAGACCTCCTGAAGAAATCTACCAGCTTGACCACGCTGATTGCCCCAGTATTCACTGAGCTGAAGCTGCAgcgcagggatggagagatgaagggagtgaTGGAGGACTTGGAGAAAAGCATCCACCTGGCTGAGGACATCTGCCCCGGAGTCACAGACAAGATGGTCAACCGCATCGTCGACAAGTTCCAGAGCTCCCCCAGGACCAATGGAtgcagggaaagagggaggactCCTGCTGTGCACACTCACTGATCTTATAACCAAAaggatattttttaaatgtatttgttgaatatgttttgtttttctattttatttaatCCCTTTAAAAGTAGGCTCAAGCTAGTGCCCAAAGCAGAGCCTGTTACTGTTATGGTAGTCAATAGTATTTTAGTTTTGTAATATTTTCAGTctgagacaacaacaaaaaactctaAGGTTGCAACATCAATCTTCTGCTGAGTATAAGACATAGCTACTTAAAGATATTTCAATTTTGAATTAATTTTTTACTGCTACTAAAAATGTTTAAGTAGCTATATTTTAGATGTTCAGTGTACTGCACTTGTTTCTGATGTCTAGCTTACCATCTTCATGTCACTTGTAGCATTTAGAAACCTGCTGTTTGGAGAACTGCATATCTAGTCAAACCACAGGAGTTCAGTACCTCTCTGCTGAGAGCAAGCCATGGTTGAGGAAAGACTCAGACCCAGTGAATGTCCATAGAAACAAAACTTCTGTTTGTGACCATTTGGAAACGGGTCACTTGTTTGGGCATTGGGGAAAGATTGTATAGGAAATGGGTGGAGGACTTTGCTGCGCAAAAATGTATCACACCCTCTCATTCCAAAAGATACAAATCATATCTATCTTATGGGATCTTAGCTCTGTAAGGGGCAATCCTATTGGAACCTTCGGAGATCTGCTTCTGAAGGAAATATGCACTGCACACACTTTGAAGGGGGTGGAGCTTTTTCTAAATATACTTGCTAGTTATTTCCCTGTTTCAGACTAGATCTCATGGGAGACGGGGTACTTTTCTGTCTTAAAGACAATATACTCTCCCTCTACCAAAAAATACTTGAGTGCTCAAGTGAAATGGCAATGTCGGTATTGTGGACGTGTAATGTTTGAAACATTGGTATGAGTCCTTGAGTACTCTCTCTACTGGGGAGTCGTGTATCTTTGAACAAATCCCAAATAAAGACTTTTATTGGGAATTTTATCAGCCAAGCTCAAATGCATACAAAAGGGTGCCATCTTTGGTGTGGTGATGACACTGCACCTTTTGGAGGAAGTATGCCAACTTAACATCCAACAGTGCCTAAAACTTAAGAATTGCAGTGATATTCTCTATTTAAACTTAAGAATTGCAGTGATATTCTCTATTTAATTGTGGTCATGTATCATCAAATGCATTAAATGGTAATAATACATTTTGCCAGAGTGTTTCAAGTTTTTAAAAGCAATAAGGTATTTGATCATTGCATATTTTTATATTTCCTCAAATGACATTCAGATGGCAAAACTacgattttttttgtttatagaTTTCTGTATCTGAACTTTATAATGGAAACCGTGTTGACTTAGCTTTACAGGAAGCTGTCAAATGTACATATTGGATAGTCTTTGCTTCAATCGTTATTCATTTTGGTTTGGTcttgaaaaataaatatttaaattaTGAA

Function

NR:

description
serine/threonine-protein kinase 26-like isoform X1

GO:

id name namespace
GO:0006915 apoptotic process biological_process
GO:0006950 response to stress biological_process
GO:0006468 protein phosphorylation biological_process
GO:0045595 regulation of cell differentiation biological_process
GO:0005737 cytoplasm cellular_component
GO:0005524 ATP binding molecular_function
GO:0004702 obsolete signal transducer, downstream of receptor, with serine/threonine kinase activity molecular_function

KEGG:

id description
K08838 STK24_25_MST4; serine/threonine-protein kinase 24/25/MST4

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021591545.2 False 3311 mRNA 0.44 11 35399336 35421810
XM_021591544.2 True 3167 mRNA 0.44 11 35399336 35421812

Neighbor

gene id symbol gene type direction distance location
LOC118945291 NA coding downstream 30774 35349365 ~ 35368562 (-)
LOC110510172 dach2 coding downstream 109798 35003916 ~ 35289538 (-)
LOC110510171 NA coding downstream 419671 34965129 ~ 34979665 (-)
LOC110510165 atg4a coding downstream 536833 34851196 ~ 34862503 (-)
LOC110510161 LOC106563678 coding downstream 584397 34809871 ~ 34814939 (-)
LOC110510173 LOC106563748 coding upstream 154 35421966 ~ 35454525 (-)
ik ik coding upstream 73473 35495285 ~ 35505716 (-)
LOC110510180 tcof coding upstream 85235 35507047 ~ 35524067 (-)
LOC110510228 LOC106563789 coding upstream 384651 35804621 ~ 35817492 (-)
LOC110510227 LOC106563788 coding upstream 419331 35841143 ~ 35871517 (-)
G2179169 NA non-coding downstream 10088 35388615 ~ 35389248 (-)
G2179167 NA non-coding downstream 11601 35387487 ~ 35387735 (-)
G2179162 NA non-coding downstream 24319 35374526 ~ 35375017 (-)
G2179158 NA non-coding downstream 30354 35368691 ~ 35368982 (-)
G2179156 NA non-coding downstream 34682 35364365 ~ 35364654 (-)
G2179204 NA non-coding upstream 50816 35472628 ~ 35473365 (-)
G2179211 NA non-coding upstream 59243 35481055 ~ 35483881 (-)
G2179135 NA non-coding upstream 82538 35504350 ~ 35506878 (-)
G2179228 NA non-coding upstream 119005 35540817 ~ 35542952 (-)
G2179286 LOC106602935 non-coding upstream 230237 35652049 ~ 35655274 (-)
G2178372 NA other downstream 590033 34792330 ~ 34809382 (-)
LOC110510135 LOC106563696 other downstream 1057523 34338911 ~ 34342460 (-)
G2177991 cfb other downstream 1252017 34092047 ~ 34216247 (-)
G2177695 NA other downstream 1887010 33511296 ~ 33512326 (-)
G2176363 NA other downstream 2754764 32643402 ~ 32644572 (-)
G2179862 NA other upstream 540172 35961984 ~ 35962832 (-)
LOC110510209 LOC106563761 other upstream 1082661 36499597 ~ 36596534 (-)
G2180120 NA other upstream 1084728 36506540 ~ 36507120 (-)
LOC110509384 NA other upstream 1555342 36975909 ~ 36979761 (-)
G2180587 NA other upstream 1560145 36981957 ~ 36982709 (-)

Expression


Co-expression Network