LOC110510173 (LOC106563748)


Basic Information

Item Value
gene id LOC110510173
gene name LOC106563748
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048593.1
NCBI id CM023247.2
chromosome length 47748341
location 35421966 ~ 35454525 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036968005.1
ATATTTTTACTGAAATAGAaggaaaatataaaatataatttaaacAATAACCGAAATGGGGACCAATTACTATTTTTTGACAAGGCTTTGTGTCACTGAAAAACCCAGAATGTAGATTCTGTTTTCCATTCAGTGGCAACAACAATGCCTtattatttacaaaaatgtcatGGCACTGGTAGGCTGCCGTTCTCTGAGCATCACAAGGCTGTATAGCTGccatttttatttcagcttttgctTCTGATGGTTTGTTGCAGAGGAAGTGCAGACATCTGGATTGGAATCATATAATTAGTGGCTAGAAAGCACTAGTCGAGACATACAGTGCTGCGATGGATGCAATTGGTGTTTCCTACTCGAACCCATTGGAGGACTACGAGATGATTCACCGGATCGGTAGTGGTACATACGGAGACGTATTTAAGGCACGAAACATCAAGACATCCGTGATCTCTGCAATCAAAGTTGTAAAACTAGATCCTGgTGATGACATCTTATCTATCCAGCAGGAGATTACCATGATTAAAGAATGCACTCACAAGAACATTGTGGCCTATTTCGGCAGCTACCTCAGAAATAACAAGCTGTGGATTTGCATGGAGTACTGCGGAGGAGGTTCCCTGCAGGACATTTATCATGTTACTGGCCCCCTGAATGAGAGGCAGATTGCATATGTGTGCAGGGAAACACTACAGGGACTGCATCACTTACACGAGACTGGGAAAATGCATAGAGATATAAAGGGAGCAAACGTTCTTCTGACAGAGCGAGGAGATGTCAAACTGGCGGATTTTGGCGTTGCAGCTGAGATCAACGCCTCCGTTGCCAAGAGGAAGTCATTCATAGGCACGCCTTACTGGATGGCACCCGAGGTGGCAGCAGTGGAGAAGAAAGGTGGCTACAACCAGCTATGTGACATCTGGGCAGTGGGCATCACCGCTATCGAGCTGGCAGAGCTTCAGCCTCCCATGTTTGACCTGCACCCCATGAGGGCCTTGATGATGATGTCAAAGAGCAGCTTCCAGCCACCCAAACTAAAGGACAAGGCCAAATGGTCTGCAGACTTTCACAGCTTTGTGAAAATATCCCTCACCAAGAACCCTCGCAAGAGGCCCAGTTCGGAGAAACTGTTACAGCACCCCTTTGTGAGTCAGCTGCTGACCAGGACTCTGGCCATTGAACTGCTGGACATGGCCAGCAACCCTGTTCTGCAAACCACACACACTATGGATGAGAGTGATCTTGACACATGCAGTGCATTCCCTGATCAGATCCATTCCTTAGCGAAACACCTGCCGGTCCAAAGGACTCAGTCTGAGGAGCATTTTGATCTGCTGAAATTTGGGCCTCCCATGAGGAAGGAGACTGAGCTCTCTCCTGACCTGGGATCATATGACGAATGGAGCATTACAGGAGATGAGAAGAACTCACCAAGTCTACTGGAGTGTGTTGAGGAAGCGTTACTTGAAAGGAGGTTAACCATAAAGAGAGCGCCCTCTGCTGAGCACTCTCCTGAAGATGAGGATATGGATAAAAGTGGTACCGTGAAGCGGAGTGGGGTCCTCAGCCCTGCCTTAAGGCATACCATCTCCCCATCCACTGACTCGACTCCTTCCACTGTCACACCTTCAGTCGCAGACTCTGCTCTGGCTGAACCCTCTCTCTTCAACTCCACTATCTTCTCAGACCTCTCACTTTCCTCCAACTGCTCGTTTGAAGAGGGCAGTGAGTCAAAGGGACTTTGGCCGGGAGAGACATCCTACATGGCCCTGGGGCCCCCACTGTCTCCAGAATGGAGCACACTGAGGAGGAGAACGGAGGACTCGAGAGGTGATTGTCATGGACTTCCACCCACGCCCAAAGTCCATATGGGGGCCTGTTTTTCCAAGGTGTTTAATGGCTGTCCATTGAAGATTCACTGTGCTGTCACATGGGTCCTGCCAAAGACTAAAGATCAACACCTCATCCTGGGGACGGAGGAGGGCATCTACACCCTGAACCTCAACGAGCTCCATGAGGACACCATGGAGAAGttaTTACCCCAGAGGTGCAGCTGGCTGTATGTCATGAACAACGTGCTAATGTCTATCTCAGGGAAATCATCCCAGCTGTGCTCCCAGAGGCTGACTACCCTGTTTGACCGTAGACATCTGCAGAAGAGGCAGGGCCACCTGTACATCAACGCCCACCGCCTCACTGAGAGGATCAACTCAAGAAAGTTTTCTGTGTCTGGGAAGATATCAGACACCAAAGGCTGTCGACGCTGCAGTGTTGTGCATAACCCGTACACTGACAGCACATTTTTGTGTGCTGTTGTACCAACTGGCCTTGTCCTACTTCTATGGTATGAGCCTCTTCAGAAGTTCATGCAACTCAAGtACATAGCTGTGAGTCTCCCAGAAACCCTCCCCATCTTTGAGCTGCTTGTCCTGGAGACTGATGAGCTGCCacaggtgtgtgtaggtgtgagtAGGCTACAGACCCCTGTCAAGACCTGTGAGCGGGTCCACTTTGACATCATCCACCTGAATGACACACCAAGAGCCCAGTCAGATAGTCGATCTATGAAGGTGATGCAGGTAACCCAGCTGGACAGAGACACAGTCCTGATCGGTCTGGAGAATACTGTGAACATTGTGAACCTGGATGGCAGCCCAAGCAAAGGGATGACCTCAACATTGACCTTTGACTTTTCCATTGAGACTCTTGTATGTTTGCAGGACAGTGTTCTGGCTTTCTGGAAGCATGGGCTTAAAGGTAGAAGCCTACATAGTGATGAGGTTACACAAGAGATCACAGATGAAAGTCGAATATTCAGAGTCTTGGGAACCTCAAGGGACATTATCTTGCAGAGTACTCCCACGGACAATCCATCAGCCTTAAGCAACTTGTACATCCTGACAGGTCATGAGAGTAGCTACTGAAGAAATCAGAGAAAGGAGGACCTTCTGGCTCGAGGAAGTACACAGCAGTCTCCTGCTACTCCTAAAAGGACAAGCGCCAAGTCAATAAGGATGGAACAAGGAGCAAAGCTGCTTACAATGGCGAGTTGTTTGCAGAAGAGACACTGCAGGAACTGTCTGAGCTGTGATTGGAGTGGGTCTCCTCAGGCTCTCTTCACATCCATGTGCCAAATGGACCTGTGAATATCAGTGGTTCTTAACATTACCATTGGTCTAGGCTACATAAAGATATTGGCAAGGATTTAAAACCACACTTGTGTGCATTCATCTGACTGggagagtcccccccccccccccccccccccaacagtatCTCAAGACTGTCTAAGTCTGCAGTAACCCAGTACCAGTCTGGACAATACTTCCCATAGGGCTGTGGTGTCAGTACTGAAGGGAAGAAAAGTAGATGACACAGTGTCCATGGTGTGAGGTGGAAAGCAatggtatcatgtagtagcaGCTCTGTGTGTAGGCTACCTGAGAAGAAGTTATATGCAGTGAAAAACGCTTATTCACCATGGGTTGATGCATAGGAGGCTGCTGAGTGAAGAATGGCTCATAATAGtggccggaacggagcaaatgaaGGGCattaaacacctggaaaccatgtgtttgatgtatttgataccattctactgattccgctccagtcattaccacaagcccgttttCCCAGATTAAggttccaccaacctcctgtggctgaTAGAGAATACATATGGAAAACATAAGTAACAGCAATTGTTCTAATTAACAGTATCAAATGTCAACAAGATGTGATTTATAGAGGCCTATTAGATTTGTTGTGCTGTGAAGCTGGCTGCTATACTCAAAATAAAAACTGACCAGATGGATATTTGGTTCCCTGTCAAACAGAAACAAATCATTCA
>XM_036968004.1
AAATATTTTTACTGAAATAGAaggaaaatataaaatataatttaaacAATAACCGAAATGGGGACCAATTACTATTTTTTGACAAGGCTTTGTGTCACTGAAAAACCCAGAATGTAGATTCTGTTTTCCATTCAGTGGCAACAACAATGCCTtattatttacaaaaatgtcatGGCACTGGTAGGCTGCCGTTCTCTGAGCATCACAAGGCTGTATAGCTGccatttttatttcagcttttgctTCTGATGGTTTGTTGCAGAGGAAGTGCAGACATCTGGATTGGAATCATATAATTAGTGGCTAGAAAGCACTAGTCGAGACATACAGTGCTGCGATGGATGCAATTGGTGTTTCCTACTCGAACCCATTGGAGGACTACGAGATGATTCACCGGATCGGTAGTGGTACATACGGAGACGTATTTAAGGCACGAAACATCAAGACATCCGTGATCTCTGCAATCAAAGTTGTAAAACTAGATCCTGgTGATGACATCTTATCTATCCAGCAGGAGATTACCATGATTAAAGAATGCACTCACAAGAACATTGTGGCCTATTTCGGCAGCTACCTCAGAAATAACAAGCTGTGGATTTGCATGGAGTACTGCGGAGGAGGTTCCCTGCAGGACATTTATCATGTTACTGGCCCCCTGAATGAGAGGCAGATTGCATATGTGTGCAGGGAAACACTACAGGGACTGCATCACTTACACGAGACTGGGAAAATGCATAGAGATATAAAGGGAGCAAACGTTCTTCTGACAGAGCGAGGAGATGTCAAACTGGCGGATTTTGGCGTTGCAGCTGAGATCAACGCCTCCGTTGCCAAGAGGAAGTCATTCATAGGCACGCCTTACTGGATGGCACCCGAGGTGGCAGCAGTGGAGAAGAAAGGTGGCTACAACCAGCTATGTGACATCTGGGCAGTGGGCATCACCGCTATCGAGCTGGCAGAGCTTCAGCCTCCCATGTTTGACCTGCACCCCATGAGGGCCTTGATGATGATGTCAAAGAGCAGCTTCCAGCCACCCAAACTAAAGGACAAGGCCAAATGGTCTGCAGACTTTCACAGCTTTGTGAAAATATCCCTCACCAAGAACCCTCGCAAGAGGCCCAGTTCGGAGAAACTGTTACAGCACCCCTTTGTGAGTCAGCTGCTGACCAGGACTCTGGCCATTGAACTGCTGGACATGGCCAGCAACCCTGTTCTGCAAACCACACACACTATGGATGAGAGTGATCTTGACACATGCAGTGCATTCCCTGATCAGATCCATTCCTTAGCGAAACACCTGCCGGTCCAAAGGACTCAGTCTGAGGAGCATTTTGATCTGCTGAAATTTGGGCCTCCCATGAGGAAGGAGACTGAGCTCTCTCCTGACCTGGGATCATATGACGAATGGAGCATTACAGGAGATGAGAAGAACTCACCGTGCAGAAGTCTACTGGAGTGTGTTGAGGAAGCGTTACTTGAAAGGAGGTTAACCATAAAGAGAGCGCCCTCTGCTGAGCACTCTCCTGAAGATGAGGATATGGATAAAAGTGGTACCGTGAAGCGGAGTGGGGTCCTCAGCCCTGCCTTAAGGCATACCATCTCCCCATCCACTGACTCGACTCCTTCCACTGTCACACCTTCAGTCGCAGACTCTGCTCTGGCTGAACCCTCTCTCTTCAACTCCACTATCTTCTCAGACCTCTCACTTTCCTCCAACTGCTCGTTTGAAGAGGGCAGTGAGTCAAAGGGACTTTGGCCGGGAGAGACATCCTACATGGCCCTGGGGCCCCCACTGTCTCCAGAATGGAGCACACTGAGGAGGAGAACGGAGGACTCGAGAGGTGATTGTCATGGACTTCCACCCACGCCCAAAGTCCATATGGGGGCCTGTTTTTCCAAGGTGTTTAATGGCTGTCCATTGAAGATTCACTGTGCTGTCACATGGGTCCTGCCAAAGACTAAAGATCAACACCTCATCCTGGGGACGGAGGAGGGCATCTACACCCTGAACCTCAACGAGCTCCATGAGGACACCATGGAGAAGttaTTACCCCAGAGGTGCAGCTGGCTGTATGTCATGAACAACGTGCTAATGTCTATCTCAGGGAAATCATCCCAGCTGTGCTCCCAGAGGCTGACTACCCTGTTTGACCGTAGACATCTGCAGAAGAGGCAGGGCCACCTGTACATCAACGCCCACCGCCTCACTGAGAGGATCAACTCAAGAAAGTTTTCTGTGTCTGGGAAGATATCAGACACCAAAGGCTGTCGACGCTGCAGTGTTGTGCATAACCCGTACACTGACAGCACATTTTTGTGTGCTGTTGTACCAACTGGCCTTGTCCTACTTCTATGGTATGAGCCTCTTCAGAAGTTCATGCAACTCAAGtACATAGCTGTGAGTCTCCCAGAAACCCTCCCCATCTTTGAGCTGCTTGTCCTGGAGACTGATGAGCTGCCacaggtgtgtgtaggtgtgagtAGGCTACAGACCCCTGTCAAGACCTGTGAGCGGGTCCACTTTGACATCATCCACCTGAATGACACACCAAGAGCCCAGTCAGATAGTCGATCTATGAAGGTGATGCAGGTAACCCAGCTGGACAGAGACACAGTCCTGATCGGTCTGGAGAATACTGTGAACATTGTGAACCTGGATGGCAGCCCAAGCAAAGGGATGACCTCAACATTGACCTTTGACTTTTCCATTGAGACTCTTGTATGTTTGCAGGACAGTGTTCTGGCTTTCTGGAAGCATGGGCTTAAAGGTAGAAGCCTACATAGTGATGAGGTTACACAAGAGATCACAGATGAAAGTCGAATATTCAGAGTCTTGGGAACCTCAAGGGACATTATCTTGCAGAGTACTCCCACGGACAATCCATCAGCCTTAAGCAACTTGTACATCCTGACAGGTCATGAGAGTAGCTACTGAAGAAATCAGAGAAAGGAGGACCTTCTGGCTCGAGGAAGTACACAGCAGTCTCCTGCTACTCCTAAAAGGACAAGCGCCAAGTCAATAAGGATGGAACAAGGAGCAAAGCTGCTTACAATGGCGAGTTGTTTGCAGAAGAGACACTGCAGGAACTGTCTGAGCTGTGATTGGAGTGGGTCTCCTCAGGCTCTCTTCACATCCATGTGCCAAATGGACCTGTGAATATCAGTGGTTCTTAACATTACCATTGGTCTAGGCTACATAAAGATATTGGCAAGGATTTAAAACCACACTTGTGTGCATTCATCTGACTGggagagtcccccccccccccccccccccccaacagtatCTCAAGACTGTCTAAGTCTGCAGTAACCCAGTACCAGTCTGGACAATACTTCCCATAGGGCTGTGGTGTCAGTACTGAAGGGAAGAAAAGTAGATGACACAGTGTCCATGGTGTGAGGTGGAAAGCAatggtatcatgtagtagcaGCTCTGTGTGTAGGCTACCTGAGAAGAAGTTATATGCAGTGAAAAACGCTTATTCACCATGGGTTGATGCATAGGAGGCTGCTGAGTGAAGAATGGCTCATAATAGtggccggaacggagcaaatgaaGGGCattaaacacctggaaaccatgtgtttgatgtatttgataccattctactgattccgctccagtcattaccacaagcccgttttCCCAGATTAAggttccaccaacctcctgtggctgaTAGAGAATACATATGGAAAACATAAGTAACAGCAATTGTTCTAATTAACAGTATCAAATGTCAACAAGATGTGATTTATAGAGGCCTATTAGATTTGTTGTGCTGTGAAGCTGGCTGCTATACTCAAAATAAAAACTGACCAGATGGATATTTGGTTCCCTGTCAAACAGAAACAAATCATTCA

Function

NR:

description
mitogen-activated protein kinase kinase kinase kinase 2-like isoform X1

GO: NA

KEGG:

id description
K08833 MAP4K5, KHS1; mitogen-activated protein kinase kinase kinase kinase 5

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036968005.1 False 3859 mRNA 0.48 32 35421966 35454523
XM_036968004.1 True 3867 mRNA 0.48 32 35421966 35454525

Neighbor

gene id symbol gene type direction distance location
LOC110510176 LOC106563749 coding downstream 154 35399336 ~ 35421812 (-)
LOC118945291 NA coding downstream 53404 35349365 ~ 35368562 (-)
LOC110510172 dach2 coding downstream 132428 35003916 ~ 35289538 (-)
LOC110510171 NA coding downstream 442301 34965129 ~ 34979665 (-)
LOC110510165 atg4a coding downstream 559463 34851196 ~ 34862503 (-)
ik ik coding upstream 40760 35495285 ~ 35505716 (-)
LOC110510180 tcof coding upstream 52522 35507047 ~ 35524067 (-)
LOC110510228 LOC106563789 coding upstream 351938 35804621 ~ 35817492 (-)
LOC110510227 LOC106563788 coding upstream 386618 35841143 ~ 35871517 (-)
LOC110510226 NA coding upstream 433466 35887991 ~ 35892734 (-)
G2179169 NA non-coding downstream 32718 35388615 ~ 35389248 (-)
G2179167 NA non-coding downstream 34231 35387487 ~ 35387735 (-)
G2179162 NA non-coding downstream 46949 35374526 ~ 35375017 (-)
G2179158 NA non-coding downstream 52984 35368691 ~ 35368982 (-)
G2179156 NA non-coding downstream 57312 35364365 ~ 35364654 (-)
G2179204 NA non-coding upstream 18103 35472628 ~ 35473365 (-)
G2179211 NA non-coding upstream 26530 35481055 ~ 35483881 (-)
G2179135 NA non-coding upstream 49825 35504350 ~ 35506878 (-)
G2179228 NA non-coding upstream 86292 35540817 ~ 35542952 (-)
G2179286 LOC106602935 non-coding upstream 197524 35652049 ~ 35655274 (-)
G2178372 NA other downstream 612663 34792330 ~ 34809382 (-)
LOC110510135 LOC106563696 other downstream 1080153 34338911 ~ 34342460 (-)
G2177991 cfb other downstream 1274647 34092047 ~ 34216247 (-)
G2177695 NA other downstream 1909640 33511296 ~ 33512326 (-)
G2176363 NA other downstream 2777394 32643402 ~ 32644572 (-)
G2179862 NA other upstream 507459 35961984 ~ 35962832 (-)
LOC110510209 LOC106563761 other upstream 1049948 36499597 ~ 36596534 (-)
G2180120 NA other upstream 1052015 36506540 ~ 36507120 (-)
LOC110509384 NA other upstream 1522629 36975909 ~ 36979761 (-)
G2180587 NA other upstream 1527432 36981957 ~ 36982709 (-)

Expression


Co-expression Network