Gene
RNA
| Item | Value |
|---|---|
| gene id | ik |
| gene name | ik |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048593.1 |
| NCBI id | CM023247.2 |
| chromosome length | 47748341 |
| location | 35495285 ~ 35505716 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| symbol | description |
|---|---|
| ik | Acts upstream of or within heart contraction. Predicted to be active in nucleus. Is expressed in central nervous system; gut; and pharyngeal arch 3-7 skeleton. Orthologous to human IK (IK cytokine). |
| description |
|---|
| protein Red |
| id | name | namespace |
|---|---|---|
| GO:0060047 | heart contraction | biological_process |
| GO:0005634 | nucleus | cellular_component |
| id | description |
|---|---|
| K13109 | IK, RED, RER; IK cytokine |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_021591553.2 | True | 2062 | mRNA | 0.50 | 19 | 35495285 | 35505716 |
35,486,000
35,488,000
35,490,000
35,492,000
35,494,000
35,496,000
35,498,000
35,500,000
35,502,000
35,504,000
35,506,000
35,508,000
35,510,000
NC_048593.1
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| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110510173 | LOC106563748 | coding | downstream | 40760 | 35421966 ~ 35454525 (-) |
| LOC110510176 | LOC106563749 | coding | downstream | 73473 | 35399336 ~ 35421812 (-) |
| LOC118945291 | NA | coding | downstream | 126723 | 35349365 ~ 35368562 (-) |
| LOC110510172 | dach2 | coding | downstream | 205747 | 35003916 ~ 35289538 (-) |
| LOC110510171 | NA | coding | downstream | 515620 | 34965129 ~ 34979665 (-) |
| LOC110510180 | tcof | coding | upstream | 1331 | 35507047 ~ 35524067 (-) |
| LOC110510228 | LOC106563789 | coding | upstream | 300747 | 35804621 ~ 35817492 (-) |
| LOC110510227 | LOC106563788 | coding | upstream | 335427 | 35841143 ~ 35871517 (-) |
| LOC110510226 | NA | coding | upstream | 382275 | 35887991 ~ 35892734 (-) |
| LOC118945701 | NA | coding | upstream | 383601 | 35889317 ~ 35889390 (-) |
| G2179211 | NA | non-coding | downstream | 11404 | 35481055 ~ 35483881 (-) |
| G2179204 | NA | non-coding | downstream | 21920 | 35472628 ~ 35473365 (-) |
| G2179178 | s226a | non-coding | downstream | 27011 | 35403440 ~ 35468274 (-) |
| G2179169 | NA | non-coding | downstream | 106037 | 35388615 ~ 35389248 (-) |
| G2179167 | NA | non-coding | downstream | 107550 | 35387487 ~ 35387735 (-) |
| G2179228 | NA | non-coding | upstream | 35101 | 35540817 ~ 35542952 (-) |
| G2179286 | LOC106602935 | non-coding | upstream | 146333 | 35652049 ~ 35655274 (-) |
| G2179290 | NA | non-coding | upstream | 152682 | 35658398 ~ 35658614 (-) |
| G2179328 | LOC106563737 | non-coding | upstream | 188920 | 35694636 ~ 35792895 (-) |
| G2179340 | NA | non-coding | upstream | 202081 | 35707797 ~ 35708325 (-) |
| G2178372 | NA | other | downstream | 685982 | 34792330 ~ 34809382 (-) |
| LOC110510135 | LOC106563696 | other | downstream | 1153472 | 34338911 ~ 34342460 (-) |
| G2177991 | cfb | other | downstream | 1347966 | 34092047 ~ 34216247 (-) |
| G2177695 | NA | other | downstream | 1982959 | 33511296 ~ 33512326 (-) |
| G2176363 | NA | other | downstream | 2850713 | 32643402 ~ 32644572 (-) |
| G2179862 | NA | other | upstream | 456268 | 35961984 ~ 35962832 (-) |
| LOC110510209 | LOC106563761 | other | upstream | 998757 | 36499597 ~ 36596534 (-) |
| G2180120 | NA | other | upstream | 1000824 | 36506540 ~ 36507120 (-) |
| LOC110509384 | NA | other | upstream | 1471438 | 36975909 ~ 36979761 (-) |
| G2180587 | NA | other | upstream | 1476241 | 36981957 ~ 36982709 (-) |
