Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC118945336 |
| gene name | NA |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048593.1 |
| NCBI id | CM023247.2 |
| chromosome length | 47748341 |
| location | 35936744 ~ 35937921 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: leucine-rich repeat extensin-like protein 3 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XR_005040497.1 | True | 806 | mRNA | 0.43 | 4 | 35936744 | 35937921 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118945335 | NA | coding | downstream | 188 | 35935360 ~ 35936556 (-) |
| LOC110510226 | NA | coding | downstream | 44010 | 35887991 ~ 35892734 (-) |
| LOC118945690 | NA | coding | downstream | 44360 | 35892318 ~ 35892384 (-) |
| LOC118945706 | NA | coding | downstream | 45028 | 35891642 ~ 35891716 (-) |
| LOC118945703 | NA | coding | downstream | 45298 | 35891372 ~ 35891446 (-) |
| LOC110509452 | LOC106563653 | coding | upstream | 31535 | 35969456 ~ 36032625 (-) |
| nf2b | LOC106563816 | coding | upstream | 187094 | 36125015 ~ 36147223 (-) |
| LOC110510222 | LOC106563811 | coding | upstream | 225228 | 36163149 ~ 36165830 (-) |
| LOC110510224 | LOC106563813 | coding | upstream | 254182 | 36192103 ~ 36194036 (-) |
| LOC110510219 | LOC106563810 | coding | upstream | 257488 | 36195409 ~ 36196374 (-) |
| G2179850 | NA | non-coding | downstream | 22433 | 35913710 ~ 35914311 (-) |
| G2179803 | NA | non-coding | downstream | 31230 | 35874221 ~ 35905514 (-) |
| G2179847 | NA | non-coding | downstream | 38755 | 35897225 ~ 35897989 (-) |
| G2179798 | NA | non-coding | downstream | 44046 | 35888982 ~ 35892698 (-) |
| G2179829 | NA | non-coding | downstream | 76340 | 35860000 ~ 35860404 (-) |
| G2179856 | NA | non-coding | upstream | 15483 | 35953404 ~ 35955677 (-) |
| G2179861 | NA | non-coding | upstream | 23283 | 35961204 ~ 35962276 (-) |
| G2179902 | NA | non-coding | upstream | 101482 | 36039403 ~ 36096507 (-) |
| G2179924 | NA | non-coding | upstream | 142463 | 36080384 ~ 36080677 (-) |
| G2179961 | NA | non-coding | upstream | 218294 | 36156215 ~ 36158086 (-) |
| G2178372 | NA | other | downstream | 1127441 | 34792330 ~ 34809382 (-) |
| LOC110510135 | LOC106563696 | other | downstream | 1594931 | 34338911 ~ 34342460 (-) |
| G2177991 | cfb | other | downstream | 1789425 | 34092047 ~ 34216247 (-) |
| G2177695 | NA | other | downstream | 2424418 | 33511296 ~ 33512326 (-) |
| G2176363 | NA | other | downstream | 3292172 | 32643402 ~ 32644572 (-) |
| G2179862 | NA | other | upstream | 24063 | 35961984 ~ 35962832 (-) |
| LOC110510209 | LOC106563761 | other | upstream | 566552 | 36499597 ~ 36596534 (-) |
| G2180120 | NA | other | upstream | 568619 | 36506540 ~ 36507120 (-) |
| LOC110509384 | NA | other | upstream | 1039233 | 36975909 ~ 36979761 (-) |
| G2180587 | NA | other | upstream | 1044036 | 36981957 ~ 36982709 (-) |
