bicdl2l (LOC106563772)


Basic Information

Item Value
gene id bicdl2l
gene name LOC106563772
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048593.1
NCBI id CM023247.2
chromosome length 47748341
location 36385268 ~ 36394770 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021591597.2
GGAAAAACGAGTTGGTAGACATTCTCTGTGTTTTGTTCCctccccttctcgctctctctttttctctcactgtcATAGACTCTTCTCACTGCCAGTCATTGTTTTTGTCCCAGTGAGATTGTGAGCTCCTCTCTTCAATTCTTTCTCTCGAACTCTCCTGTTGTCGGTTTGGTGTTTGTGACCCCTCTATTATGCCATGGGAGACCCTGTGCCTTTCTCCATCCTGAACGAGAGACTGAGACCACAGTTGACTGCCATGGAACAACTCTGCTACTCCCTGCACACCCTGGAAGATGGACACCAGCTGGCTGGCATTGTCAGTGGCAGTTCAACCACAAGGTCTACAATACTGAGAGATGAAATACAAACACAGGATGATTCAAGCTCGACCACGACCGAACCAGAGGATGACCCAGAGAAGGAGGATGTGGTCACAGAAAGGTTGACTTCGCTGACCGAAGAGGGGGACAACTGTCATGATCTGTTGACCATGACCAATACCTGCTTGATGCAATCTTTGACCGCAGAAGATGCTGGTCCTGATGGTTCTGGTGAGCTGACCGTGGTCAAGGAGAGTTTGGCCATAGAGAGTGGCGATCCAGGTGTTTTGACCATGGTCAGTGAGGGAGATGGTTCTGATGAGGTCAGTGAGGATAAAAGCCCTTTCAGACGGAGCTACGTAGACCGAACCTTACCGGACCTCATCAGGAGTGGACAACAGCTCGGCAGACGCAGAACATTAGGACCAGTGTCCGACACGTTGAAGGAAGTGCGTCGGGAGGTGGCGCTGTCAGTGAGACGCAGTCTGAGGCTGAAGGCTCAGGTGGACAAACTACAGGAGGACAGAGACGAACCGGGATGGATCCAACACAGGgagaaggtTACAGAGGAGGTTCAGTCCGTTCTGAGGTTGTTGCTTCCTCTGACAGAAGCAGAGTCCAGCACAGTAGAACCATCTGTTCAGGAGAACAGTCTGGATACAGCGCTGGTCCTGCTGCAGAACGTCGCACGCAAACTAGCTCTCAGCCACACAGCACAGGATTCCCAGTTCTGGGTTAAAAAAGGGAATGGTATGGATGACAGTGCTGTTCTACAACAGGCACTACGGGACAGAGACGATGCCATGGACAAGAAGAAGGCCATGGAGGCGGAGCTTCTCCGCAGTAAGACAGAGATGATGTTACTGAACAACCAGCTGTTGGAGGCTGTGCAGAAACGACTGGAGCTCTCACTGGAACTAGAGGCCTGGAAGGACGACATCCAGAGGATCCTGCAGCAGCAACTCCAGAGCCAGCAGGCAGCAGAACAAGCCCAGAGGAAACCCTCCCGTCTGGGGCTGCTGAGGAGAACTAAAGAACCCCCACACCAGAAGCCAGCCTCCACCCCTGCCCCCTCGCCGGCCCTACAACGCACCCCTGTTACCTGGAGGGACAGGCTGAAGAGGGGGAAGACGGGTCGTCATGGTGACCAGGATGCAGCGCAGGCGTCACCGGTGTCGCGGTCGTCAAGTAGCAGCAGCAGACTCGAGGGGTTTCATACCATAGACTTATAATACAACATGAGAGGGACAAATCATTGCTACTTTATACATTTTTCAAACTGTTGGTTCCTACTGGGAGAGATACATGGATTACACACATTCACAATGAGAATAATTCTCTACTTGAGGAAAACATTCATAGTACATTTGGGTTGTAGAGTCTCTCCAACTGTAATCATTAATTTAACTATAACGCGTGTCTTTGATTAAAGCAATTGAAACGTCCTTCCAAATGCTGAGCGTGCTACTTATTCTAGTCGAGGAGACAAGTACACAGCTAAAAATGAGGGATAAAACAGCCACAATGTCCCAAGGATATCACAACTTCCCATTCTCCTTAACCCATAATATTTACCAAGTGCAGACTAACTGGTATGAGACAAGacatttgtttttatttcctTCAATTTTAATATACATCAGTAATACATCATTAAATATTTCTCAATTATTCACCCAATGTATCTCACAACTACATAACATTTCTTGACATTGAATGAACATTACTGTGGCAAAGTTAAAATGCATAGGCCTATCGACAACTGAACGAGAGGATGAAAAGGCATGCTCATAGTAAAATAGACTAAATTACGGTTTGTCAATTTCAACATGAACataaataaattaaacatttCACCTCATACCTGGGTTAAAATTGGTTCAATTAGTATTGGTTtttatttcaaatactttaggtGTGCGCTTGATTGAGCTTGTACAGTGttaatggaatagtcccaaaagtgcaaaccccatCAACCCAGGTTCAATATCTGTAAATCTTTCCCCTAGACACATTCTTGACCAACAGAAAGCCAATATGAACCATGGGGTCTGAGTATGATTGGTACGGGATTGCCTAGCTACTCAATTACAATCTATTTTAGTTAAAACATGGTTAAGCTAGTTCAACACGAACCATTCTGATATCTTTAGTTATTCAAACCTGGCATCCAATGGAGTACACTTTTTGTTTAACTTTCAACTGATCAAAATACTTTCAACTACAAAAATTATAAACACACTAGGACCCTTTTGGGGCTATGAGTTACTGTGATAAAATATAACTGGCAACACGGAGACCAGTCTCAGAGCTGCTGGATAACTGCGGAAACTTGTTACACATTTTACAGAGATGAAAAAGGagatgaaaacaaacaaaaaaaagcctcagaggcacaaacacacagacagactgagcTGCAGTATCACTGATTGTACTTTTCCCCAGACACACAAGCACCAAAACATTTCACTGAAGAACAAACCCGACCACAGTAGAGGAAATCTGATAAGATTAAGGACAATATGAGTTAGATTTTTGCAGCATATCTGACATACCCATGAACACTAAAACATggcagaccaattctgatcttttgcccaattatttgCGAAACATCTGATTGGTCAAACGacatatcagaattgggctgcctgtgtaaatgcagcctttgTCTACAGAGTCAAAGTGATTCATATACTTGAATAAATGACCATTGAAACAGACGCTAGTAGATTATCACAAACAGAGTACACAGTTAATTTTTTACAAAATGGCCACTCACAACACAGAAGAGTAGAGAATATTACCCAGAGTGTAGTGTAGAGCATTGGGTTTTCCAACTCCAGTCCGAGAGAGTGAAGGCTTTTGTTCTAACCCTGCACTAAACACACCAGTTTCAAGTAATCAACTATTCATGGTCTTCTGTCTGGAACTTGATTAGTTGAATAAGGGTGTTAGTGTGGGGAGTCAGGACCCACCGTCCTAGGGATCTCCAGAGTGTGTTAGTGTAGGGCTGGAACAAAACCCTGCAGGTCCAGTAGATTCCCCAGGACCAGAGTAGGACCCCCTCTGCTGTAGAGTCTAACCTGGGAGATACAGGAGATAATACAGTACCTGGAAAGATATAGCTTTATTAGCGCTTAAAATGGCATAGAAAGATAGCTATTTAGCCATCTGAATGACATCACACTATAAAAAAGGTCAAACGTGTTACACTACATGTAATCTAGTAGTACGACAAAAAAAATACTGAAATTAATTCCAAAGACTAAGGGTCAGATTTACTAAAGCGTTTGCATCAATTGAAACACCTTTTTCCCCCAGCTGAGGGTAAGATaccaacaaacaaaaacacagctTTAACACTAGGCTACACTGTGTGCTTTCACTTAATGTTTTATTCCATTCGGTAACAATCATTTTACCACTTTGTTCTCCTTTCTGGCTAATTCCCACAGGCTTAGTAACATACCGCACACAAAACACACCATGTATAAAAGCGATTGCACACAGCAACACAACAGCCCCGATCTCTCTGGGGAGCCGTAGATGTTCCTTCACTGACATCAGGTGCTAAATCCACGTCAGTTCAGACAGAACCAGAGCACTTATTCATGAGTGctcatctaggatcaggttcACCCTTTGTTCATACGTTATTCACTATGATCTAAAAaggaaaaactgatcctagatcagcaccctAATCTATGGTTCAGTGCTGCAGTTGTACTTTACATTCCCTCTGCTTGAGAGGTCCTGTCTTTAGTCCAGACTTCTAATATAAAATAATTAgggcccgtattcataaagcatTGTAGGATTAGGAGTGCTGATGTAggatatgtatatacacacatacatacactcccccccccccccaggggttGCCTGGCTACCCAAGCACCTTGCTCCAGCCAAACGTTACACCACACCCACGGGTGTAAATTGCTTCATCGCAATGAGTCTAAATTTAAAATTCTAGAACAGAAAAAACATTCTaaccgttctgattggtcccagaaacagATGGGTTGGGCCAAAGCCAGAACACACACGGTTAAAGCAGAGGTTTGATTAGTTAGAGATAAGCCAATCGCTGATTACAACACCCGTCTTTGACATCACCGCAAACGACttcaatagctaggtttccatccaattggcgacagattttcacatgaatatttaaaaaatctgcagAGATGAGTTTCCATCAAATGGACTtgtggataaaaggctgtgcgtgatgacgtagtccACATAAAAATACCTTTTGCGGATTCACATGTACCCAATAAaaaagttaaatgggtttctatggcacTTTCAACTCCAggcctactgatggttttgtcacaaaa

Function

NR:

description
BICD family-like cargo adapter 2 isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021591597.2 True 4690 mRNA 0.44 6 36385268 36394770

Neighbor

gene id symbol gene type direction distance location
LOC110510218 LOC106563809 coding downstream 164081 36200768 ~ 36221187 (-)
LOC110510217 LOC106592238 coding downstream 173794 36210084 ~ 36211474 (-)
LOC110510219 LOC106563810 coding downstream 188894 36195409 ~ 36196374 (-)
LOC110510224 LOC106563813 coding downstream 191232 36192103 ~ 36194036 (-)
LOC110510222 LOC106563811 coding downstream 219438 36163149 ~ 36165830 (-)
sumf2 sumf2 coding upstream 29640 36424410 ~ 36447869 (-)
LOC110510211 LOC106563768 coding upstream 59158 36453928 ~ 36463448 (-)
LOC110510210 akt2 coding upstream 78022 36472792 ~ 36488924 (-)
LOC110510209 LOC106563761 coding upstream 104827 36499597 ~ 36596534 (-)
LOC110510208 LOC106563760 coding upstream 249178 36643948 ~ 36663311 (-)
G2180067 NA non-coding downstream 7830 36359400 ~ 36377438 (-)
G2180066 LOC106563774 non-coding downstream 25979 36358160 ~ 36359289 (-)
G2180062 NA non-coding downstream 54531 36330512 ~ 36330737 (-)
G2180042 NA non-coding downstream 88284 36296510 ~ 36296984 (-)
G2179961 NA non-coding downstream 227182 36156215 ~ 36158086 (-)
G2180086 NA non-coding upstream 700 36395470 ~ 36395789 (-)
G2180094 NA non-coding upstream 7403 36402173 ~ 36404046 (-)
G2180095 NA non-coding upstream 28136 36422906 ~ 36423112 (-)
G2180102 NA non-coding upstream 55246 36450016 ~ 36450306 (-)
G2180103 NA non-coding upstream 56346 36451116 ~ 36451326 (-)
G2179862 NA other downstream 422436 35961984 ~ 35962832 (-)
G2178372 NA other downstream 1575965 34792330 ~ 34809382 (-)
LOC110510135 LOC106563696 other downstream 2043455 34338911 ~ 34342460 (-)
G2177991 cfb other downstream 2237949 34092047 ~ 34216247 (-)
G2177695 NA other downstream 2872942 33511296 ~ 33512326 (-)
G2180120 NA other upstream 111770 36506540 ~ 36507120 (-)
LOC110509384 NA other upstream 582384 36975909 ~ 36979761 (-)
G2180587 NA other upstream 587187 36981957 ~ 36982709 (-)
G2181143 LOC100136155 other upstream 838099 37232869 ~ 37233899 (-)

Expression


Co-expression Network