LOC110510211 (LOC106563768)


Basic Information

Item Value
gene id LOC110510211
gene name LOC106563768
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048593.1
NCBI id CM023247.2
chromosome length 47748341
location 36453928 ~ 36463448 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021591593.2
AATGCACATCATCATAGACGCTTTTTGTACAGCTCGGACGGAATATTGAACAGACAGGGCGTATAGGTGCATTGCCAGTTACAATGTATCGACTCGAGAACTCAGCGACAACATTAACGGGTGTTTGAAATACTTTTACATTGTTATTCTGGATGAGGATGCCCTACCGAGCAGGAGGTAAAACATTTTTCTACAGGATGGTACCCTAGCTAGGACTTGAAACTTGAGGAATTCAGTTATCTACATGATTCAAAGATGCTTTGGTTGGTATCTGCCTATAGACTGAACGCTTGTAAGGTCCTAGGGCGGTGAGGTTGACAAGGCAGACGGTTTAAGGACAAGGACAGAATAAATGgTCCGTGATGCCAAAGGAGCAGGCACATTTTGGGGAGTGGCCCGAGCGCGTACCCCAGGGCACCTCTAAGAATGCCAAGGATAAGAGTAACAGTGCCACTCTGCGGGCATCCCAGTGTGGCACTCACAGAGACCAGGAAGGTAGGAGAATGGGCATGAACGGGAGGATGTCACGGTCTGACTCGGAGAAGGACTCAGAGAAAGACTCTGGATACTCTGAGACTGGTTCGGACTCGGTGCAGAATGATCTGGATGACCAGCGTATCAGTGTAAGTGAGGCCCACCGAGCCCACAGCAGTAGCAGCTCCCTGAACCACCGGGCCCACAGCAGTAGCAGCTCCCTGAACCACCGGGCCCACAGCAGTAGCAGCTCCCTGAACCACCGGGCCCACAGCAGTAGCAGCTCCCTGAACCACCGGGCCCACAGCAGTAGCAGCTCCCTGGGCCACAACATGCCCCCGTTTGAGGAGCAAAACCCCATCTACGTCATCAAGAACCTGGTGGTTAAACCGTCTGGACCAGAGCAACTACTGCACAGAACCCTGGCATGGGGGGGAGGATGGGACAGTCTGTCTGGTTCCAAGGCCCCCACCCAGCTCCTACTCATCCAAAAACCAGGGGTACCCTCCCCCGTCCCTGCCCACAACAATCCACAGGGCCAGTCCAAGAAAGGGGGCAGTAGAAGCAACAAGAACCATAACAGCAAGAACTCGTACCTCCCCATCCTCAACTCCTACCCCCGCATTGCCCCCCAGCCGAGGAAGGAAGgctcagagcagagcagagagggtgCAGGGGATGTGAAGGAGAGAAGCATAGAGGGCCAGAGCCGGAGCAAGAGGGTGTGTACGGAGGACAAGAGAGAAGCAGTGTCCACCACCACTCATCTTCGACCACAGCAGCACCAACACCACCAGCGAGAGAGCAGAACCCAATCCTATTACAAAGTCAACAGCAGCCGAagctcctcctcccacctccctcaCCATTCCATGGGTGGCCCTGCCTCCTCCACCCAGCAGGGATCTCACTACTGCCACCAACATGCCAAacccagcccctctccctcccactccaaCGGTATTGGCTCCCCATCCGTCATCAGCTCCCAAAAATCCTCCTCCACctcgtcctcctcgtcctccGCCGACAGCTGGGCCCCAGAGGCCACAGTAGACCTGTCCAACTGCTTGTCTGACTGCTCGTTGGTGCGTCAGCGGCGCTTCCTCAACACGGCAGAGATCCTGAGCCAGTCGGGCCTGCTGGCCATCACGCTGCGCACCAAGGAGCTGCTGCGCCAGAATGCCGCCACCGAGAAAGAGCTGGCCCAGCTCCGCCAGCACGCCCAGCTACTCTGCTTGGCGGCCCAGACCGGCCAAGAGGCCACCCAGCAAGGACCTAACGAAGGTCCCAGCCCCATGGACAAGCTGCTCCAAGCCATGTCCCAATCAGGACGCTACCCGAGCCTCGACTGGACCTACTTTAATGCCAACAGCAACAACCGTCCAGAGAAAGGAGACGAGGCTGAGAAAGACATCAGGGACAGTAATAACAACGACAAGCATAGCCCGTCTCAGAATCCGTTGGTGGCGGCGCCCCTTGGTAACCATGACGATAGCACATCACCTCCGTCGCCACTTTTCGCCCTGTCTCCTGACCCAGAGGACTGTCCCGATGTTCTCGGCAGCttgctctccacctctccatctccccctccccaaAGGTGGGGCCGGAGACATGGGGGCAGCGCTAAGCCCCTGTGTGACCCCACCATGCCCCCGGAAAGCTCCACCCACCGGGCCTATTTACTCTAGCGCTTATGGGTAGTGGCCTCCATGAGGGAAATTTTGATGGAGGAGCATGTGCCACTGTAGGGGGAGAAGCTAAGGAGCGAGGGGAATGCACTGAACTGTGCAAAACTGTGAATACCCGATCTTAACTGTATTACATCTGatggactttttttttttgctgttgaCTCTACTACCACACTTAAATAATTATCACAATATTGTTTCTTTTATTGATCTAATTAGCCAGGGTATTTCAATAATGAGAACATACAAATATGCTTCTTAGGGGACGTTGTAAACAAACATGAGGGTCCATGAATGGATTATCCAATTCAGTACATTACATTCCAGTACATCTATCATTAAATGTATGGAATAGAATTATTCTGCTAGGGCCCTTTTTAAACATAGAAAGGTTCTCTTGGTTGTAGTTTTCTTAAAACCCTTGGAAAAACGATAACAGCACACGAGGATACTAGGGGCTTTTCAACATAATGGGAAAATGAACACAGACCATTCCATTATCCGTTTGCTCAGGCTTTCCGACGCTCCTTGACTGCTTCAGTGGCGCCGACAGTGTGAAAGGGGACTTTGACCTCAACCGACCGTCGGGGTAGTCTCCAATGAACTCCCTCATGCCATGGTCAGTGCTACTGTGCTCTCTGGTCATTTTGAGCGCTAAAGCCATTCTCAGAATAAAGAATGGCCTGCATGTAGCCTAGTATACTGCAGCTCTGAAGTGCTTTATATATTGTGGGTCatgttctctctttcttcacAGTCATATTACCAGCCAGATTCTCTGGTGTAACATGAGACTAGAGTCAGATATCATGGAGACAGACACTGTACTAGAGGCACATTGGTCATAATACCTGATTGAATTGTAGTTAGGCTATACAGTAGTCAGACTATTTTGATGTGCATGGCACTGGGATATCACTGGCTATTTCTGTATAATTTGGTATGCTCCTTTGATCCTATTTGTAAGTGTGTTACCTAAAATGCAGTATGATTGGATTATGGTATTGTGGGTATGGGCACGGACATGTAATATATGTTTGTCTGCAGCTTTATGGTGGATTAAAGGAGCAATCCGCATTTCAAACAAACGTTTTTGCCCCGTCTCTGATTTGGTAAAACGCTGCGGGACGGGGCTAAAGAAATGTAAACACTCTCAAAAGAAGAGAtatagctatggatgcaaggaccgaACATCATTGAGATCAACATTATAGtcttaaccatgttttgaggctataagTGTTTTTTAAAACAATTATATTGTTTACAAACAACAGATTATAAAAAGGTTATATTTTCAGTTCAGATGggaatctacagttgaagttcatgaggcatttatactgtgtacaaaacattaagaacgactaccttatattgagttgcactttcatctgaattcacctggtcagtcagtcatggacagagcaggtgtgtataatgttttgtacactcagtgtataagttAGATTTGTCAAGAATCAATAGCATCATTCATTGGAAAGTCAAATGTATGTAGCAATCTCAGCTTGTACAGTTGTGAAATTTGACTGGTTCTATGAAAACACTAAACTATAGGACTTCAGTTATTGTAGATAGAATTAGAAGTGAATTTGAAGATTATATAAAATGTATGCAATTGTGTCAAACCGAGTGTTGTTCCCTCCTGCTTCAGGCGCCTGAACACGTAGGCATTAACATGATGTAATAAAGAGCTCAAATTCATTCAATAAATACAAATTACTTCAA
>XM_021591594.2
AATGCACATCATCATAGACGCTTTTTGTACAGCTCGGACGGAATATTGAACAGACAGGGCGTATAGGTGCATTGCCAGTTACAATGTATCGACTCGAGAACTCAGCGACAACATTAACGGGTGTTTGAAATACTTTTACATTGTTATTCTGGATGAGGATGCCCTACCGAGCAGGAGACTGAACGCTTGTAAGGTCCTAGGGCGGTGAGGTTGACAAGGCAGACGGTTTAAGGACAAGGACAGAATAAATGgTCCGTGATGCCAAAGGAGCAGGCACATTTTGGGGAGTGGCCCGAGCGCGTACCCCAGGGCACCTCTAAGAATGCCAAGGATAAGAGTAACAGTGCCACTCTGCGGGCATCCCAGTGTGGCACTCACAGAGACCAGGAAGGTAGGAGAATGGGCATGAACGGGAGGATGTCACGGTCTGACTCGGAGAAGGACTCAGAGAAAGACTCTGGATACTCTGAGACTGGTTCGGACTCGGTGCAGAATGATCTGGATGACCAGCGTATCAGTGTAAGTGAGGCCCACCGAGCCCACAGCAGTAGCAGCTCCCTGAACCACCGGGCCCACAGCAGTAGCAGCTCCCTGAACCACCGGGCCCACAGCAGTAGCAGCTCCCTGAACCACCGGGCCCACAGCAGTAGCAGCTCCCTGAACCACCGGGCCCACAGCAGTAGCAGCTCCCTGGGCCACAACATGCCCCCGTTTGAGGAGCAAAACCCCATCTACGTCATCAAGAACCTGGTGGTTAAACCGTCTGGACCAGAGCAACTACTGCACAGAACCCTGGCATGGGGGGGAGGATGGGACAGTCTGTCTGGTTCCAAGGCCCCCACCCAGCTCCTACTCATCCAAAAACCAGGGGTACCCTCCCCCGTCCCTGCCCACAACAATCCACAGGGCCAGTCCAAGAAAGGGGGCAGTAGAAGCAACAAGAACCATAACAGCAAGAACTCGTACCTCCCCATCCTCAACTCCTACCCCCGCATTGCCCCCCAGCCGAGGAAGGAAGgctcagagcagagcagagagggtgCAGGGGATGTGAAGGAGAGAAGCATAGAGGGCCAGAGCCGGAGCAAGAGGGTGTGTACGGAGGACAAGAGAGAAGCAGTGTCCACCACCACTCATCTTCGACCACAGCAGCACCAACACCACCAGCGAGAGAGCAGAACCCAATCCTATTACAAAGTCAACAGCAGCCGAagctcctcctcccacctccctcaCCATTCCATGGGTGGCCCTGCCTCCTCCACCCAGCAGGGATCTCACTACTGCCACCAACATGCCAAacccagcccctctccctcccactccaaCGGTATTGGCTCCCCATCCGTCATCAGCTCCCAAAAATCCTCCTCCACctcgtcctcctcgtcctccGCCGACAGCTGGGCCCCAGAGGCCACAGTAGACCTGTCCAACTGCTTGTCTGACTGCTCGTTGGTGCGTCAGCGGCGCTTCCTCAACACGGCAGAGATCCTGAGCCAGTCGGGCCTGCTGGCCATCACGCTGCGCACCAAGGAGCTGCTGCGCCAGAATGCCGCCACCGAGAAAGAGCTGGCCCAGCTCCGCCAGCACGCCCAGCTACTCTGCTTGGCGGCCCAGACCGGCCAAGAGGCCACCCAGCAAGGACCTAACGAAGGTCCCAGCCCCATGGACAAGCTGCTCCAAGCCATGTCCCAATCAGGACGCTACCCGAGCCTCGACTGGACCTACTTTAATGCCAACAGCAACAACCGTCCAGAGAAAGGAGACGAGGCTGAGAAAGACATCAGGGACAGTAATAACAACGACAAGCATAGCCCGTCTCAGAATCCGTTGGTGGCGGCGCCCCTTGGTAACCATGACGATAGCACATCACCTCCGTCGCCACTTTTCGCCCTGTCTCCTGACCCAGAGGACTGTCCCGATGTTCTCGGCAGCttgctctccacctctccatctccccctccccaaAGGTGGGGCCGGAGACATGGGGGCAGCGCTAAGCCCCTGTGTGACCCCACCATGCCCCCGGAAAGCTCCACCCACCGGGCCTATTTACTCTAGCGCTTATGGGTAGTGGCCTCCATGAGGGAAATTTTGATGGAGGAGCATGTGCCACTGTAGGGGGAGAAGCTAAGGAGCGAGGGGAATGCACTGAACTGTGCAAAACTGTGAATACCCGATCTTAACTGTATTACATCTGatggactttttttttttgctgttgaCTCTACTACCACACTTAAATAATTATCACAATATTGTTTCTTTTATTGATCTAATTAGCCAGGGTATTTCAATAATGAGAACATACAAATATGCTTCTTAGGGGACGTTGTAAACAAACATGAGGGTCCATGAATGGATTATCCAATTCAGTACATTACATTCCAGTACATCTATCATTAAATGTATGGAATAGAATTATTCTGCTAGGGCCCTTTTTAAACATAGAAAGGTTCTCTTGGTTGTAGTTTTCTTAAAACCCTTGGAAAAACGATAACAGCACACGAGGATACTAGGGGCTTTTCAACATAATGGGAAAATGAACACAGACCATTCCATTATCCGTTTGCTCAGGCTTTCCGACGCTCCTTGACTGCTTCAGTGGCGCCGACAGTGTGAAAGGGGACTTTGACCTCAACCGACCGTCGGGGTAGTCTCCAATGAACTCCCTCATGCCATGGTCAGTGCTACTGTGCTCTCTGGTCATTTTGAGCGCTAAAGCCATTCTCAGAATAAAGAATGGCCTGCATGTAGCCTAGTATACTGCAGCTCTGAAGTGCTTTATATATTGTGGGTCatgttctctctttcttcacAGTCATATTACCAGCCAGATTCTCTGGTGTAACATGAGACTAGAGTCAGATATCATGGAGACAGACACTGTACTAGAGGCACATTGGTCATAATACCTGATTGAATTGTAGTTAGGCTATACAGTAGTCAGACTATTTTGATGTGCATGGCACTGGGATATCACTGGCTATTTCTGTATAATTTGGTATGCTCCTTTGATCCTATTTGTAAGTGTGTTACCTAAAATGCAGTATGATTGGATTATGGTATTGTGGGTATGGGCACGGACATGTAATATATGTTTGTCTGCAGCTTTATGGTGGATTAAAGGAGCAATCCGCATTTCAAACAAACGTTTTTGCCCCGTCTCTGATTTGGTAAAACGCTGCGGGACGGGGCTAAAGAAATGTAAACACTCTCAAAAGAAGAGAtatagctatggatgcaaggaccgaACATCATTGAGATCAACATTATAGtcttaaccatgttttgaggctataagTGTTTTTTAAAACAATTATATTGTTTACAAACAACAGATTATAAAAAGGTTATATTTTCAGTTCAGATGggaatctacagttgaagttcatgaggcatttatactgtgtacaaaacattaagaacgactaccttatattgagttgcactttcatctgaattcacctggtcagtcagtcatggacagagcaggtgtgtataatgttttgtacactcagtgtataagttAGATTTGTCAAGAATCAATAGCATCATTCATTGGAAAGTCAAATGTATGTAGCAATCTCAGCTTGTACAGTTGTGAAATTTGACTGGTTCTATGAAAACACTAAACTATAGGACTTCAGTTATTGTAGATAGAATTAGAAGTGAATTTGAAGATTATATAAAATGTATGCAATTGTGTCAAACCGAGTGTTGTTCCCTCCTGCTTCAGGCGCCTGAACACGTAGGCATTAACATGATGTAATAAAGAGCTCAAATTCATTCAATAAATACAAATTACTTCAA

Function

NR:

description
putative uncharacterized protein DDB_G0289263

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021591593.2 False 3920 mRNA 0.49 4 36453928 36463448
XM_021591594.2 True 3816 mRNA 0.49 5 36453928 36463448

Neighbor

gene id symbol gene type direction distance location
sumf2 sumf2 coding downstream 6059 36424410 ~ 36447869 (-)
bicdl2l LOC106563772 coding downstream 59158 36385268 ~ 36394770 (-)
LOC110510218 LOC106563809 coding downstream 232741 36200768 ~ 36221187 (-)
LOC110510217 LOC106592238 coding downstream 242454 36210084 ~ 36211474 (-)
LOC110510219 LOC106563810 coding downstream 257554 36195409 ~ 36196374 (-)
LOC110510210 akt2 coding upstream 9344 36472792 ~ 36488924 (-)
LOC110510209 LOC106563761 coding upstream 36149 36499597 ~ 36596534 (-)
LOC110510208 LOC106563760 coding upstream 180500 36643948 ~ 36663311 (-)
gfpt2 LOC106563757 coding upstream 201554 36665002 ~ 36682231 (-)
LOC110510204 LOC106563756 coding upstream 220618 36683012 ~ 36693105 (-)
G2180103 NA non-coding downstream 2602 36451116 ~ 36451326 (-)
G2180102 NA non-coding downstream 3622 36450016 ~ 36450306 (-)
G2180095 NA non-coding downstream 30816 36422906 ~ 36423112 (-)
G2180094 NA non-coding downstream 49882 36402173 ~ 36404046 (-)
G2180086 NA non-coding downstream 58139 36395470 ~ 36395789 (-)
G2180110 NA non-coding upstream 5125 36468573 ~ 36469873 (-)
G2180112 NA non-coding upstream 26164 36489612 ~ 36489898 (-)
G2180114 NA non-coding upstream 33740 36497188 ~ 36497491 (-)
G2180121 NA non-coding upstream 53886 36517334 ~ 36519604 (-)
G2179862 NA other downstream 491096 35961984 ~ 35962832 (-)
G2178372 NA other downstream 1644625 34792330 ~ 34809382 (-)
LOC110510135 LOC106563696 other downstream 2112115 34338911 ~ 34342460 (-)
G2177991 cfb other downstream 2306609 34092047 ~ 34216247 (-)
G2177695 NA other downstream 2941602 33511296 ~ 33512326 (-)
G2180120 NA other upstream 43092 36506540 ~ 36507120 (-)
LOC110509384 NA other upstream 513706 36975909 ~ 36979761 (-)
G2180587 NA other upstream 518509 36981957 ~ 36982709 (-)
G2181143 LOC100136155 other upstream 769421 37232869 ~ 37233899 (-)

Expression


Co-expression Network