LOC110510208 (LOC106563760)


Basic Information

Item Value
gene id LOC110510208
gene name LOC106563760
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048593.1
NCBI id CM023247.2
chromosome length 47748341
location 36643948 ~ 36663311 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036967853.1
gttGTATCCCATTCGTTAGTGGCAGCACGGGGGGAGGAGCcatgagtgaaggggaggggctCTTCCACAGCGTGCAGCTCGGCCCTGGACAGTGTCCTTGGGGTCCCTGTGGCGGTGAAGAAACTGAGCCGGCCCTTCCAGAACCAGACCCACGCCAAGCGGGCCTATAGGGAGCTGGTGCTGCTCAAGTGCGTCAATCACAAAAATaTTATTAGGCTCCTGAATGTCTTCACACCACAGAATTCACTGGAGGAGTTCCAGGATCTCTACCTGGTGATGGAGCTGATGGATGCCAGTCTGTGCCAAGTCATCCACATGGATCTGGACCATGAGAGGATGTCCTACCTGCTCTACCAGATCCTCTGTGGCATCAGACACCTGCACTCCGCTGGCATCATCCACAGGGACCTGAAGCCCAGTAACATAGTGGTGAAGTCTGACTGTACTCTGAAGATCCTGGACTTTGGGCTGGCCAGAACAGCCTGTACTAACTTCATGATGACCCCTTACGTTGTTACCCGATACTACAGAGCACCAGAGGTCATCCTGGGCATGAAGTATAAAGAGAATGTGGACATCTGGTCAGTGGGATGCATCATGGGAGAGATGGTGAAGGGCAGCGTTATATTCCAGGGCACGGATCACATTGACCAGTGGAACAAGGTGATTGAGGTTCTGGGCACACCCCCCATGGAGTTTATGAACCGTTTGATGGAGACTGTGAGGAACTATGTGATGAACAAGCCCCAGTACCCAGGGGTCAGCTTCTCTCAACTCTTCCCTGACTGGGCCTTCCCGGCAGAGACAGAGCAGGATCAACTCAAGACCAGTCAAGCACGGGACCTGCTTTCCAAGATGCTGGTGATTGACCCAGAGAGCCGTATTTCCGTGGAGGATGCCCTGGATCACCCCTACATCCACATGTGGTACGACCCAGGAGAGGCTGATGCACCACCACCACAGATATCTGATAAACAGCTGGAGGAGCGAGAACACAGCATTGAACAGTGGAAAGAGCTGATCTATGACGAGTTGATGGACTGggaggagaggaaccagaatGGAGTAATGAAGGAGGACTGTGCAGaTGAAGTGGTGAACCACAGTGCTACAGCTTCCCAGTCGTCCTCTACGAGTGACTTCTCCTCAATGTCCACTGAGCAGACCTTGGCCTCTGACACTGACAGCAGCTGTGTTGACACCCTCACAGGGGCGCTAGAGGAGTGACAGTGAGCCTCTTTTCACCCTGGCATCTCTGTTTTTTTTTCAATCATCACTAACTATCCATTTTCTTAGGTAGCACTTTTCACATTACTTTATACTGTCTATTTCTACTTTGGGTCCCGCTGGATGGTAAATCATTCAACcgcttttatttttttaaactgaaaaTGATTTAAATTgaactctctctgtcactctttccCTATCTCTGTTGTAAATAGTCCATTCCTACTGTACCATGGTTCAAACAAGTCATGCACCTCTAGACTTGTTGTCCAAGCCAAGAGCACACACTGTTCAATGTGTAGTTTGACCACCTAAGGTTTCAGTATAAAGTACTGTATATGCATTAAACTAGGGCTAGGCTATAATGTCTTATGACTGTTTTGTCATCGGAAATATCTAATGATGaacaaaaaacattgctgcatgttACTACAAATGAATACTTAACTACACATAGAAACAGCTGTGATAAAAGATCTTCATGTATTTCCATCCAGAGGACATTAGCCTCCTCTGTGTGAAGAAACAGTACTTGGCTCTGGTCTGGGTCTTTCCTAATGAGGGTAAAGAGTGATACATTTtatgcatgttatgtgtgttcaTGTATATAAGTATCtatctatactgtatactgtgtgtttaaatgtattgaTTGTTGTGATGCTGAGACTGGGTTTTACAGCTGATCCAAATATGCTGAGGCATACAAACTGTACAAAATACATCCATTTATTTTGGAACAAACTATTGTTAAAATGCAATGGGAAACATGTCAGAAATGTGTTGATGTTTGAAAGATGTATTATAATGAAACTGAAGGGGAAAAAGGTGAACGGTGGATACATTGCACTTTCTAGACAATTTCAGCTTAAAGTCATTCCAAGAAAAATATTGATTAAAAGAGGGATACAATCATG
>XM_021591591.2
CTCGTGGTACTGTGAGGAATTGTCCCAGCAGCACCCCTTCGCCTGCCTCCGCCCCAGCAGTCATGCTACGGACAGGACCGCAACATTTTCAGCCAAACTACAAGGAAACATAAACACAAAGTCTCCAATTTCACTGAACATACCAAGTGGAACAATTCTTCTTCTAGACACATCTGGTGCCGCGACATTTAATTTGGTTAGCGGGTGTACGCATGGGAGTGATCCGGCAAAAGAAAAGGCAGGAGgttGTATCCCATTCGTTAGTGGCAGCACGGGGGGAGGAGCcatgagtgaaggggaggggctCTTCCACAGCGTGCAGGTGGGTGACTCCACCTTCACTGTGCTGACCCGCTATCAGCAGCTCCGCGCTATCGGGTCTGGTGCCCAGGGCATTGTCTGCTCGGCCCTGGACAGTGTCCTTGGGGTCCCTGTGGCGGTGAAGAAACTGAGCCGGCCCTTCCAGAACCAGACCCACGCCAAGCGGGCCTATAGGGAGCTGGTGCTGCTCAAGTGCGTCAATCACAAAAATaTTATTAGGCTCCTGAATGTCTTCACACCACAGAATTCACTGGAGGAGTTCCAGGATCTCTACCTGGTGATGGAGCTGATGGATGCCAGTCTGTGCCAAGTCATCCACATGGATCTGGACCATGAGAGGATGTCCTACCTGCTCTACCAGATCCTCTGTGGCATCAGACACCTGCACTCCGCTGGCATCATCCACAGGGACCTGAAGCCCAGTAACATAGTGGTGAAGTCTGACTGTACTCTGAAGATCCTGGACTTTGGGCTGGCCAGAACAGCCTGTACTAACTTCATGATGACCCCTTACGTTGTTACCCGATACTACAGAGCACCAGAGGTCATCCTGGGCATGAAGTATAAAGAGAATGTGGACATCTGGTCAGTGGGATGCATCATGGGAGAGATGGTGAAGGGCAGCGTTATATTCCAGGGCACGGATCACATTGACCAGTGGAACAAGGTGATTGAGGTTCTGGGCACACCCCCCATGGAGTTTATGAACCGTTTGATGGAGACTGTGAGGAACTATGTGATGAACAAGCCCCAGTACCCAGGGGTCAGCTTCTCTCAACTCTTCCCTGACTGGGCCTTCCCGGCAGAGACAGAGCAGGATCAACTCAAGACCAGTCAAGCACGGGACCTGCTTTCCAAGATGCTGGTGATTGACCCAGAGAGCCGTATTTCCGTGGAGGATGCCCTGGATCACCCCTACATCCACATGTGGTACGACCCAGGAGAGGCTGATGCACCACCACCACAGATATCTGATAAACAGCTGGAGGAGCGAGAACACAGCATTGAACAGTGGAAAGAGCTGATCTATGACGAGTTGATGGACTGggaggagaggaaccagaatGGAGTAATGAAGGAGGACTGTGCAGaTGAAGTGGTGAACCACAGTGCTACAGCTTCCCAGTCGTCCTCTACGAGTGACTTCTCCTCAATGTCCACTGAGCAGACCTTGGCCTCTGACACTGACAGCAGCTGTGTTGACACCCTCACAGGGGCGCTAGAGGAGTGACAGTGAGCCTCTTTTCACCCTGGCATCTCTGTTTTTTTTTCAATCATCACTAACTATCCATTTTCTTAGGTAGCACTTTTCACATTACTTTATACTGTCTATTTCTACTTTGGGTCCCGCTGGATGGTAAATCATTCAACcgcttttatttttttaaactgaaaaTGATTTAAATTgaactctctctgtcactctttccCTATCTCTGTTGTAAATAGTCCATTCCTACTGTACCATGGTTCAAACAAGTCATGCACCTCTAGACTTGTTGTCCAAGCCAAGAGCACACACTGTTCAATGTGTAGTTTGACCACCTAAGGTTTCAGTATAAAGTACTGTATATGCATTAAACTAGGGCTAGGCTATAATGTCTTATGACTGTTTTGTCATCGGAAATATCTAATGATGaacaaaaaacattgctgcatgttACTACAAATGAATACTTAACTACACATAGAAACAGCTGTGATAAAAGATCTTCATGTATTTCCATCCAGAGGACATTAGCCTCCTCTGTGTGAAGAAACAGTACTTGGCTCTGGTCTGGGTCTTTCCTAATGAGGGTAAAGAGTGATACATTTtatgcatgttatgtgtgttcaTGTATATAAGTATCtatctatactgtatactgtgtgtttaaatgtattgaTTGTTGTGATGCTGAGACTGGGTTTTACAGCTGATCCAAATATGCTGAGGCATACAAACTGTACAAAATACATCCATTTATTTTGGAACAAACTATTGTTAAAATGCAATGGGAAACATGTCAGAAATGTGTTGATGTTTGAAAGATGTATTATAATGAAACTGAAGGGGAAAAAGGTGAACGGTGGATACATTGCACTTTCTAGACAATTTCAGCTTAAAGTCATTCCAAGAAAAATATTGATTAAAAGAGGGATACAATCATG
>XR_002471538.2
GCCGCTCGTGGTACTGTGAGGAATTGTCCCAGCAGCACCCCTTCGCCTGCCTCCGCCCCAGCAGTCATGCTACGGACAGGACCGCAACATTTTCAGCCAAACTACAAGGAAACATAAACACAAAGTCTCCAATTTCACTGAACATACCAAGTGGAACAATTCTTCTTCTAGACACATCTGGTGCCGCGACATTTAATTTGGTTAGCGGGTGTACGCATGGGAGTGATCCGGCAAAAGAAAAGGCAGGAGgttGTATCCCATTCGTTAGTGGCAGCACGGGGGGAGGAGCcatgagtgaaggggaggggctCTTCCACAGCGTGCAGGTGGGTGACTCCACCTTCACTGTGCTGACCCGCTATCAGCAGCTCCGCGCTATCGGGTCTGGTGCCCAGGGCATTGTCTGCTCGGCCCTGGACAGTGTCCTTGGGGTCCCTGTGGCGGTGAAGAAACTGAGCCGGCCCTTCCAGAACCAGACCCACGCCAAGCGGGCCTATAGGGAGCTGGTGCTGCTCAAGTGCGTCAATCACAAAAATaTTATTAGGCTCCTGAATGTCTTCACACCACAGAATTCACTGGAGGAGTTCCAGGATCTCTACCTGGTGATGGAGCTGATGGATGCCAGTCTGTGCCAAGTCATCCACATGGATCTGGACCATGAGAGGATGTCCTACCTGCTCTACCAGATCCTCTGTGGCATCAGACACCTGCACTCCGCTGGCATCATCCACAGGGACCTGAAGCCCAGTAACATAGTGGTGAAGTCTGACTGTACTCTGAAGATCCTGGACTTTGGGCTGGCCAGAACAGCCTGTACTAACTTCATGATGACCCCTTACGTTGTTACCCGATACTACAGAGCACCAGAGGTCATCCTGGGCATGAAGTATAAAGAGAATGTGGACATCTGGTCAGTGGGATGCATCATGGGAGAGATGGTGAAGGGCAGCGTTATATTCCAGGGCACGGATCACATTGACCAGTGGAACAAGGTGATTGAGGTTCTGGGCACACCCCCCATGGAGTTTATGAACCGTTTGATGGAGACTGTGAGGAACTATGTGATGAACAAGCCCCAGTACCCAGGGGTCAGCTTCTCTCAACTCTTCCCTGACTGGGCCTTCCCGGCAGAGACAGAGCAGGATCAACTCAAGACCAGTCAAGCACGGGACCTGCTTTCCAAGATGCTGGTGATTGACCCAGAGAGCCGTATTTCCGTGGAGGATGCCCTGGATCACCCCTACATCCACATGTGGTACGACCCAGGAGAGGCTGATGCAGTGAGTCTGGCTGTAATATAATAATAAGATCACCCCTACATCCACATGTGGTACGACCCAGGAGAGGCTGATGCACCACCACCACAGATATCTGATAAACAGCTGGAGGAGCGAGAACACAGCATTGAACAGTGGAAAGAGCTGATCTATGACGAGTTGATGGACTGggaggagaggaaccagaatGGAGTAATGAAGGAGGACT

Function

NR:

description
mitogen-activated protein kinase 9-like isoform X2

GO: NA

KEGG:

id description
K04440 JNK; mitogen-activated protein kinase 8/9/10 (c-Jun N-terminal kinase)

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036967853.1 False 2147 mRNA 0.46 11 36643948 36661243
XM_021591591.2 False 2472 mRNA 0.47 12 36643948 36663307
XR_002471538.2 True 1485 mRNA 0.53 11 36645536 36663311

Neighbor

gene id symbol gene type direction distance location
LOC110510209 LOC106563761 coding downstream 47414 36499597 ~ 36596534 (-)
LOC110510210 akt2 coding downstream 155024 36472792 ~ 36488924 (-)
LOC110510211 LOC106563768 coding downstream 180500 36453928 ~ 36463448 (-)
sumf2 sumf2 coding downstream 196079 36424410 ~ 36447869 (-)
bicdl2l LOC106563772 coding downstream 249178 36385268 ~ 36394770 (-)
gfpt2 LOC106563757 coding upstream 1691 36665002 ~ 36682231 (-)
LOC110510204 LOC106563756 coding upstream 20755 36683012 ~ 36693105 (-)
LOC118936290 LOC106563755 coding upstream 30923 36694234 ~ 36697607 (-)
LOC110510203 LOC106602921 coding upstream 42576 36705887 ~ 36795455 (-)
LOC110510202 cnot6 coding upstream 168952 36832263 ~ 36842130 (-)
G2180177 NA non-coding downstream 41462 36602193 ~ 36602486 (-)
G2180150 NA non-coding downstream 76535 36564824 ~ 36567413 (-)
G2180121 NA non-coding downstream 124344 36517334 ~ 36519604 (-)
G2180114 NA non-coding downstream 146457 36497188 ~ 36497491 (-)
G2180417 NA non-coding upstream 35398 36698709 ~ 36699060 (-)
G2180420 NA non-coding upstream 38214 36701525 ~ 36701818 (-)
G2180421 NA non-coding upstream 38607 36701918 ~ 36702143 (-)
G2180480 NA non-coding upstream 137533 36800844 ~ 36801148 (-)
G2180120 NA other downstream 136828 36506540 ~ 36507120 (-)
G2179862 NA other downstream 681116 35961984 ~ 35962832 (-)
G2178372 NA other downstream 1834645 34792330 ~ 34809382 (-)
LOC110510135 LOC106563696 other downstream 2302135 34338911 ~ 34342460 (-)
LOC110509384 NA other upstream 313843 36975909 ~ 36979761 (-)
G2180587 NA other upstream 318646 36981957 ~ 36982709 (-)
G2181143 LOC100136155 other upstream 569558 37232869 ~ 37233899 (-)
LOC110510193 LOC106563731 other upstream 571482 37234793 ~ 37241163 (-)
nsrp1 nsrp1 other upstream 820337 37482837 ~ 37498898 (-)

Expression


Co-expression Network