gfpt2 (LOC106563757)


Basic Information

Item Value
gene id gfpt2
gene name LOC106563757
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048593.1
NCBI id CM023247.2
chromosome length 47748341
location 36665002 ~ 36682231 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036967854.1
AAACAGGGGGCGGGGTACTGGGTTCCTACACGCCTTCACTTTAAAAGTTGTAGCCCGACATCTCTGAATATCTTCCACAACATCCAAGATACTTTTCACTTGAAAGACTACGATATTCTGTTGGACCATGTGTGGAATTTTTGCCTATCTGAACTACAGAGTGCCACGGACAAGGAAGGAGATCTTTGACACACTGGTGAAGGGACTGCAGAGACTTGAGTACAGGGGATATGACTCTGcagGTGTCGGAGTGGATGGCCCTAGGAAAAATGACAATGGTGACAACGTCAACATTTGCCTGATCAAGAAGAGGGGGAAGGTCAAGGCTCTGGATGAGGAGCTCTACAAGAACGACTCCATTGACCTGGACATTGAGCTGGACACACACTTTGGCATTGCTCACACCCGCTGGGCGACACATGGAGAGCCCAACGCTGTCAACTGCCATCCACACCGCTCCGACAAGAACAACGAATTTGTTGTGATCCACAATGGAATCATCACTAACTACAAGGAGCTCAGGAAATACCTGAAATCCAAGGGGTACAAGTTTGAGTCGGAGACGGACACCGAGGTCATCCCCAAGCTGATTAAATATGTCTATGACAACAGCGAGAACGATTATGTGTCCTTCTCCACCCTGGTGGAGCGCGTCATCCAGCAGCTGGAAGGGGCTTTTGCTCTGGTTTTCAAAAGCATCCACTTCCCGGGGGAAGCTGTAGCCACCAGGAGAGGAAGTCCTCTGCTGATAGGCGTGAGGAGCAAGTATGAGCTGTCTATGGAACAGATTCCTATTCAGTACAACAGTACTGGTCACTTTATAGAAGGCATCCAGCAGAGGAACTTCAGGAACAGGGTGGACAGCACCGTAGCCTTGCACTCCGTCAGTGACAGGAAGGCAGTGGAGTTCTTCTTTGCTTCTGATGCCAGCGCTATCATTGAACACACCAACAAGGTGATCTACCTGCAGGATGACGACATAACAGCGGTGGCCCAGGGCAAGCTGTCCCTGCACCGTATGAGCCGCTGTGCCGGGGAGGACCCTAACCGGGCCATCCAGACCCTACAGATGGAGCTGCAGCAGATCATGAAAGGGAACTTCAAAGCCTTCATGCAGAAGGAGATTTTTGAGCAGCCAGAGTCTGTCTTCAACACCATGAGAGGAAGGATCTGTTTTGAAACCAACACAGTGGTCCTGGGGGGGCTGAAAGACCATCTGAAGGAGATCAGGCGCTGCAGACGCCTCATCCTGATTGGCTGTGGGACCAGTTTCCATGCTGGAGTGGCGACCAGACAGATTCTGGAGGAGTTGACTGAACTGCCTGTGATGGTGGAACTGGCCTCTGATTTCCTGGACCGCATCACTCCTGTCTTTAGAGATGACGTCTGCTTTTTCATCAGCCAGTCTGGTGAGACAGCAGACACCCTGATGACACTGCGTTACTGTCAGGGCCGCGGAGCTCTGACGGTGGGCATCACCAACACAGTGGGCAGCTCCATCTCCAGGGAGACAGACTGTGGTGTTCACATCAACGCTGGCCCTGAAATCGGCGTGGCCAGCACCAAGGCGTACACCAGCCAGTTTGTGGCCCTCACCATGTTTGGTTTGATGATGAGTGAGGACAGAATCTCCCTGCAGAAGAGGAGACTGGAGATCATCAACGGATTGAGGATGCTGCCAGGGTTGATTAAGGAGGTTCTGACTCTGGACGACCAGATCAAAAACATTGCAAGCGAGCTGTACCAGCAGAGGTCCCTGCTGGTTATGGGCCGTGGATACAACTACGCCACCTGTATGGAGGGGGCACTGAAAATCAAAGAGATCACGTACATGCACTCAGAGGGCATCCTGGCTGGGGAGCTGAAGCACGGTCCCCTGGCTCTCATCGACAAACACATGCCTGTCATTATGATCATCATGAAAGACGCCTGCTACACCAAGTGTCACAACGCTCTGCAGCAGGTCACAGCAcgccagGGGCGGCCCATTATCCTGTGTTGCCAGGACGACCCTGAGATCACTAAGAATGCTTACAAGACCATTGAGTTGCCACAGACAGTGGACTGCCTTCAGGGCGTCCTCAGTGTCATTCCTCTCCAGCTCATGTCCTTCCACTTGGCTGTGCTCCGAGGATACGATGTGGACTGCCCCAGGAACCTAGCCAAGTCTGTGACAGTGGAGTAACTACTAGTTTCAAACCAGTCAAAATACCATAATGCAGTCAGGCGTGTCTTTCTCTGTActttgtgtactgtgtgtgttggcAGGTACTGAATGTGTCATTTTAACTGGGTATTTATCAGGGTTTGGGTCAATTTGAATTGAAGGCAgtccattcaggaagtaaactcaAATTCCAATTAAATTATTGAGAAAATGTATTTTCAATGACTTCAATCAACTTAAAAGGAAAACCTATTTAAAAATGTTGGGATTTTCAATTAAAATCCTGAATTTACTGACTTCAatttgaattgaccccaaccctggtattTATGGTAGATGTTAAACTCTGAAGAGTCGTCATGACTCAAGTGGTGTGCTGGAGTTCTATCAGTGAGTTAAATTCAATGACATTTACTCAATAAGTGCCTTGTGaatgtttaattttattttttatatatacataagGAAGGGACAtatatattctattctgtttACTGCTCGGCACTGAAGCAAAGGAACAATGTCATAGCCTATTGTTTACATTTAGTCTCAAAATGTTTACGGTTGTGCAATACGTAGACTGACAAGGACTAAAGTGTCTTGGTGTTTGTTTGTAATAGCTCGCACATCATTTAATTTGCATGATGCCCACTATACCTTTTTAAACAGTGAAGGAACAGTTGAATCTTACCGTTACAGAAGCTAGAGAGATAATATGACAATTATGTATTCCAACTCTCTATTCCTCTGTATTTGTTTGAGCCAAAGAGAAAACAAAGCAAAGGACTGTTGGCTATATGGACAATTTCTCGTTTGATGTCCTCTTTACAGCGGGAAAATATATGAGTACTTTGAGGCTGTTACTGTATAACGCCCTTATCATACGCAAATGATTTTTAGACCAAACGCGTGTACATGTACATTGCGACATATGTTTAAAATTGTagatatttattgtattttatatCTGATTATTAGTCTTACGTGTCTAATTTTGAATAGGCCAGATTCTGTCCCCTAGTCTTTGACTATGTGTATTACttgtttatttcttttttttaatacaattattttttacccttta

Function

NR:

description
glutamine--fructose-6-phosphate aminotransferase [isomerizing] 2-like

GO: NA

KEGG:

id description
K00820 glmS, GFPT; glutamine---fructose-6-phosphate transaminase (isomerizing)

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036967854.1 True 3251 mRNA 0.46 19 36665002 36682231

Neighbor

gene id symbol gene type direction distance location
LOC110510208 LOC106563760 coding downstream 1691 36643948 ~ 36663311 (-)
LOC110510209 LOC106563761 coding downstream 68468 36499597 ~ 36596534 (-)
LOC110510210 akt2 coding downstream 176078 36472792 ~ 36488924 (-)
LOC110510211 LOC106563768 coding downstream 201554 36453928 ~ 36463448 (-)
sumf2 sumf2 coding downstream 217133 36424410 ~ 36447869 (-)
LOC110510204 LOC106563756 coding upstream 1835 36683012 ~ 36693105 (-)
LOC118936290 LOC106563755 coding upstream 12003 36694234 ~ 36697607 (-)
LOC110510203 LOC106602921 coding upstream 23656 36705887 ~ 36795455 (-)
LOC110510202 cnot6 coding upstream 150032 36832263 ~ 36842130 (-)
LOC118945293 NA coding upstream 248042 36930273 ~ 36935334 (-)
G2180177 NA non-coding downstream 62516 36602193 ~ 36602486 (-)
G2180150 NA non-coding downstream 97589 36564824 ~ 36567413 (-)
G2180121 NA non-coding downstream 145398 36517334 ~ 36519604 (-)
G2180114 NA non-coding downstream 167511 36497188 ~ 36497491 (-)
G2180417 NA non-coding upstream 16478 36698709 ~ 36699060 (-)
G2180420 NA non-coding upstream 19294 36701525 ~ 36701818 (-)
G2180421 NA non-coding upstream 19687 36701918 ~ 36702143 (-)
G2180480 NA non-coding upstream 118613 36800844 ~ 36801148 (-)
G2180120 NA other downstream 157882 36506540 ~ 36507120 (-)
G2179862 NA other downstream 702170 35961984 ~ 35962832 (-)
G2178372 NA other downstream 1855699 34792330 ~ 34809382 (-)
LOC110510135 LOC106563696 other downstream 2323189 34338911 ~ 34342460 (-)
LOC110509384 NA other upstream 294923 36975909 ~ 36979761 (-)
G2180587 NA other upstream 299726 36981957 ~ 36982709 (-)
G2181143 LOC100136155 other upstream 550638 37232869 ~ 37233899 (-)
LOC110510193 LOC106563731 other upstream 552562 37234793 ~ 37241163 (-)
nsrp1 nsrp1 other upstream 801417 37482837 ~ 37498898 (-)

Expression


Co-expression Network