LOC110510196 (LOC106563728)


Basic Information

Item Value
gene id LOC110510196
gene name LOC106563728
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048593.1
NCBI id CM023247.2
chromosome length 47748341
location 37053673 ~ 37059512 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036967469.1
CACTCTGACTAGTGACCACCACTCACTAAAATAAGCCTGTGATCTAAGGTGGGTGGTCCGACCGTCAGAACCCAGTCTTCCACTAGCAAAGGAAGCTCTGCCTTGAATAAAGAGAGCAGTTTCTTTCAGCCTCATTCGGAAGTGAGTTTGCTGATATCTGGAGGTAGTTCTGGAATTTCAATAGCAGGGACGATGCAGGAACCagactgtgacctggccaagcaGAGGAAACAGTTGGTCCAGGAACTGTGCATGGAAAGACAAGGAGAGCACTTTGACCTGGGGAAGAAGATCAGCGTTCCTCAGGATGTGATGATGGAAGAGCTTAACCTGCGGTCTAACAGAGGTTCCAGAATGTACcaggagagacagaagagggtGGAGAGGTTCACCTTGGAGAACGTAGCACCAGACACTCACAGGGTGGTGCCCCACGACCCCCAGCAGCCAGACCATAGCAGTTCACACAACCAGGGAGCCTTACAAAGAGGGAAGAATAATTACCACACAGAGGTCTATATTGGACAACCAGGAAGAAACAGCCTAGTGAGATCCCTGAAGAACACAATAGCCAGTAAGGgaaaccccagtgtcctggcccCAGGTTACAATGGGCCTCTGAAAGAAGTTCCTCATGAGAGGTTCAACGTCACTGTGATTCCCAAGTCCTACTGCTCCCCATGGCAGATTCAGCACCATAACGGTAACAGTGACAAGCTGCTTTCTGCCATCTCTGCCCATCTCCCTGAGCTGCCACAGAAGCTCACCCCAAACAACTACAGGTGCTTCAACAGGGCCCCGATGCCATTTGGGGGGACAGCAGGTAGTGTGAGGATGTTCCCCCTGCCAGGGTTTGAGCTCCTGCAGGCCCATACTGAACCGAGTCGGACCTGGGAGAGCATATGTGACCGGCCCAACTTCAACCGCACCCCAAGGGGCTGGGCTGCCCACTACACTGCTGAAACTGAGACTTCAGACCTCTGAGCCCATGGCTGTGACGGAGAGCATCATGGGCAActtgtgactgactgatctacaaataatatttAGTTATATATGGTGGAAGGTGATTTGTCGATCAGTCTTGACTCTCCTGTAAAGTCGGCTTCAATGTCGAACGTGCTCCATGACAGCTTTAGATGACCTCGCTACACTCTTACAGACATGAACTGCAAGCAAGTCCAAGCAGTGGATACTAATGTGCAATTTTCTAGCATGTAATCACTTTAGAAAAATAATGTTCTCTCCTTGTCTTGTTCTGCCGCAGCTAATGATGTCCACAATGTCTTGAAGTATAACCAGGTCATACTTCATCAAGGTCACAACTTGTTAAATTATGAAACAAAAACCAAAAACACTTTAAAAGAAAGGATATGTTTAATGAAGCAAAAATGTTAACCATACACTTTTCACAGTTATAATAAAAGACGTTGACAATGCTGTGGAGTCATGGACACCTTCAATCTTTAGATAATAGTGCCACCACATGGAAGTAAAATGGTCTTAACAATTGGTTGTTCTGAAGAACGTTAACGTCGGACAATTCTGCATAAAATGCATTATAAGGAAAAAGAATTGTAGAAATGGAGACATTCTCTATAAGAAAGGTTCAGTACAATATGCACAACTTGCAAACGtaaccctccctccccctttcaaATATACAAGTCAGAGATa

Function

NR:

description
myozenin-2-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036967469.1 True 1677 mRNA 0.46 5 37053673 37059512

Neighbor

gene id symbol gene type direction distance location
arl3l1 LOC106563754 coding upstream 2044 37048213 ~ 37051629 (+)
LOC110510201 LOC106563753 coding upstream 182070 36869593 ~ 36871603 (+)
LOC118945292 NA coding upstream 409522 36637911 ~ 36644151 (+)
LOC110510207 LOC106563759 coding upstream 418265 36614866 ~ 36635408 (+)
LOC118945346 NA coding upstream 554048 36487463 ~ 36499625 (+)
LOC110510194 LOC106563726 coding downstream 14415 37073927 ~ 37211008 (+)
rs14 LOC100194652 coding downstream 158032 37217544 ~ 37220508 (+)
cd74b LOC100136155 coding downstream 172824 37232336 ~ 37235298 (+)
LOC110510192 LOC106563729 coding downstream 183562 37243074 ~ 37264474 (+)
LOC118945320 NA coding downstream 205247 37264759 ~ 37267070 (+)
G2180603 NA non-coding upstream 23 37053446 ~ 37053650 (+)
G2180383 NA non-coding upstream 10567 37042486 ~ 37043106 (+)
G2180380 NA non-coding upstream 49797 37003660 ~ 37003876 (+)
G2180379 NA non-coding upstream 58312 36995161 ~ 36995361 (+)
G2180375 NA non-coding upstream 72987 36980398 ~ 36980686 (+)
G2180611 NA non-coding downstream 11748 37071260 ~ 37071486 (+)
G2180670 NA non-coding downstream 106220 37165732 ~ 37166086 (+)
G2180691 NA non-coding downstream 152428 37211940 ~ 37212145 (+)
G2180705 NA non-coding downstream 163412 37222924 ~ 37223329 (+)
G2180382 NA other upstream 11488 37041723 ~ 37042185 (+)
G2180378 NA other upstream 71059 36982346 ~ 36982614 (+)
G2180218 LOC106563757 other upstream 373376 36678571 ~ 36680297 (+)
G2179454 LOC106602907 other upstream 1128642 35912490 ~ 35925031 (+)
G2179418 NA other upstream 1197211 35851654 ~ 35856462 (+)
G2180811 NA other downstream 357905 37417417 ~ 37468092 (+)
G2180897 NA other downstream 601075 37660587 ~ 37662215 (+)
G2180928 NA other downstream 645636 37705148 ~ 37705729 (+)
G2181669 NA other downstream 1114544 38174056 ~ 38184872 (+)
LOC110509461 uspl1 other downstream 1738045 38760853 ~ 38819031 (+)

Expression


Co-expression Network