LOC110509383 (LOC106563737)


Basic Information

Item Value
gene id LOC110509383
gene name LOC106563737
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048593.1
NCBI id CM023247.2
chromosome length 47748341
location 37404947 ~ 37407196 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036967880.1
GGTTGGGAGTTCACACCAAGTAACATGTGACATAAAGAAGTGTTCTCTCCCTGATACGCAAGCAGAAGATAAATGATCCCCATGATAATTATAGTTCTGGTGGCCACAGCGGCAGCACAAGTTAGTGCTACGTTCTGTAATCTCACTGAGGAGAGTGGAAATCATCAATGCTATGGGGCTGTGGGAGAATGTTTGTCCTTACATCTGACTGCAAACAGGGCTGAAGAAAGAATTACATTGAAGAAAGGTGATAATCGTATTCTGAACTTCCAAACTGGAGAAGACTGGAGATCTAAATTGCATCAGGATTATGTGAATCGCTCCGAGTTCTTAAATAACACCACATTCAGGCTGGACAGTGTTATAGAGGATGACTCTGGAGATTACCAATTGAATATATTTAATTCAGAGGGAACACAGTTGCGGAGAGTCAACATGCAACTTGAGATACAAGCCCCGGTGTCAGAGCCAGTGTTGTCTCACCTCTGTCTGCCTCATGGAGAGACCGTGGTCACATGCTCCTCAGAGGGAGATGGTCTTCAGTACAGCTGGACCCTGAATGGCCAGAATCTGACCAGGAGTGTAGCCTATGACCACCACCAGAACAGTGTCATCATACTGAAGAGTGATGTGACAGGAACTCTGACCTGTCTGGTTCAGAATAAAGTCAGCACCAGCAActccactattcatctactgGCCTGCCAAAGTAATGTCCGAACAGTTTCCTTCCCACAATTTTTCTCCTCCCAGATTCGTTTTGTAATTGTGACAGTAGGTATAGCTCTAGCTGTTGGAACTCTTGTCCTCCTTCTTGCGGTGTTTGTTGGCGTAAACCGTCTCTGTGGGAAACTGAGATTTGGACATAATACTTCAGGTTGCTCTAATGATGAGGGTGCTGCTGTTGTATACACTGAAGTATTcaataaaagaaagagagaagtcaACCAGAAACCTACAGAGATGGTGGAGTATGGAGAGATCAAAATGGCTGCCAGTGTTAATGAGGAAGAAAGCCCCAAGAATCAGGGGGACATGGAAATGACAACCAACCAGACATATGACACATCTTTTCTGACAACTTTCGGCAGGACTTAGTAGAAAACAAAAATGTAAGAGTGTATTACTCCCTTGTATATGTTTGTGTTGTCATTTGAGTCTTTGAAAATGTGTATTGCTTCAAATCTTGAACTTTTAACCCTTTCAACCATACCTCTTAACCAAATGGAGGGACGTTGGTCTGAAACAACAGATGACTGTTAAATATCTTAATTTTATGATCGTGTGATGTTTTCAGTGTTTGGGATCTTTTGCAATATTGTGTGTTTGCCATCCATTCTCCTTCATTTGCTGCTGACTTGGGATTGTACTTTATCTGGAAATGTCAGTGTTAAATGCTAAACGTAGGAGAGAAACATTGATGAACATGATAGCTTAACTTCCTTGCAATATCATACTTTTTAAACTTGAAAAGCTATTTTACA

Function

NR:

description
uncharacterized protein LOC110509383

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036967880.1 True 1484 mRNA 0.42 6 37404947 37407196

Neighbor

gene id symbol gene type direction distance location
LOC110510185 LOC106563738 coding downstream 16700 37384321 ~ 37388247 (-)
LOC110509442 NA coding downstream 73773 37322235 ~ 37331174 (-)
LOC118936394 NA coding downstream 86130 37317863 ~ 37318817 (-)
LOC100136950 m-csfr coding downstream 90785 37304199 ~ 37314162 (-)
LOC110510188 LOC106563734 coding downstream 108406 37284368 ~ 37296541 (-)
nsrp1 nsrp1 coding upstream 84687 37482837 ~ 37498898 (-)
LOC118945348 NA coding upstream 145375 37552571 ~ 37565815 (-)
LOC110510233 LOC106563796 coding upstream 223573 37627521 ~ 37656552 (-)
LOC118945268 NA coding upstream 257957 37665153 ~ 37668711 (-)
LOC110510234 LOC106563797 coding upstream 263513 37670709 ~ 37716255 (-)
G2181230 LOC106563735 non-coding downstream 48866 37351992 ~ 37356081 (-)
G2181222 NA non-coding downstream 55533 37349179 ~ 37349414 (-)
G2181221 NA non-coding downstream 55907 37348760 ~ 37349040 (-)
G2181216 NA non-coding downstream 68452 37336264 ~ 37336495 (-)
G2181210 NA non-coding downstream 78165 37326453 ~ 37326782 (-)
G2181225 NA non-coding upstream 22029 37429225 ~ 37434153 (-)
G2181262 NA non-coding upstream 22830 37430026 ~ 37430889 (-)
G2181227 NA non-coding upstream 28246 37435442 ~ 37438927 (-)
G2181228 NA non-coding upstream 42049 37449245 ~ 37449823 (-)
G2181224 NA non-coding upstream 44601 37451797 ~ 37455476 (-)
LOC110510193 LOC106563731 other downstream 165154 37234793 ~ 37241163 (-)
G2181143 LOC100136155 other downstream 171048 37232869 ~ 37233899 (-)
G2180587 NA other downstream 422238 36981957 ~ 36982709 (-)
LOC110509384 NA other downstream 425186 36975909 ~ 36979761 (-)
G2180120 NA other downstream 897827 36506540 ~ 36507120 (-)
G2181304 NA other upstream 129469 37536665 ~ 37538240 (-)
G2181315 NA other upstream 373386 37780582 ~ 37787673 (-)
LOC110509458 LOC106592337 other upstream 753481 38160179 ~ 38237799 (-)
G2182508 NA other upstream 1507410 38914606 ~ 38914926 (-)

Expression


Co-expression Network