LOC110510235 (LOC106563798)


Basic Information

Item Value
gene id LOC110510235
gene name LOC106563798
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048593.1
NCBI id CM023247.2
chromosome length 47748341
location 37729564 ~ 37737582 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021591624.2
TATTATTGCGTATTTCACAGCGGTAATGGCGCTCGGTCGCATGTTTTCAGCAGAAAGTGTGGGTCTAATAGGAATATGTAGTTTGAGCGTCTGAAATTTTGATTTGTACGTAAAATGTCTAAACTACAGGTGTTGAGTGTGTTTATTACAGAGCGGCTAACAGCAGCGGCTGTGGATATATTTGGTTCGGCGGAGAAAACGTTAGCAGAGTACCGGGAGCGGCTGACAACAGCGGCGGTAGAGATATTTGTTGTGGTAGAAAATACGGTAGCAGAGGTTCAGGGAGAGAACGACCGTCTACGGGGGCTTCTTCTGGATCATTTCGGAGCAGACCCCAAGCAGGTAACTCTCCCTGAAGAGGAGGTTCCCCCTAACCAGCAGCCGCACTGTGAGCAGGAGTGGAGCCCCAGTCTGCGGCAGGAGGACCCAGAGCCCACCCAGATTACAGAGGAACTCCGGACCagtcaggaggaagagcagcttcaaAGACTTAGGTCTGCTACCACAGAGGTCATACAGTTGATATTTATTCCTCCCTGTGTGGAAAGTGACTGTGATCAGGACAGCAAAAAGGACTCTCTACCCACCAATACAACTGAACAGACCCAATCAGATGAAGAGCACTACAGTATCAGAGTATCAGAACCAACCAGTGACTCTCAGACGCTCTCTGTACTACATCCAGATTGTTCTGCAGCTCCAAGTGAAATCATTGTAAGTATTGATGAGGAGGAGAGTGAAGAACTACCGTCAGGGTCAAAGAGAACCCGGGACAAGAAAGGACAAAGCTCTCAAGTCTGCACTGAAGCCAAGACAACCGAGGAGCAGAAAGCACCATTGAAGTGTCACACAAGCAAGAGGCGATACAAGTGTCCTGTGTGCAGTAAACTGTTTAAGGCACCAGTCAGTTTAAAAGTACATCAGAGAATTCACAAAGCAGAGAAACGACACACGTGTCCTTTCTGTGGAAAAGGCTTTAAATCACTAAATGGTCTACAACGACACAAAAAAGTTCACACAGAGGAGAAAGAACCACAGCGGTGTTCTTTGTGCAGTGAATCCTTCCTTTGCACAGCTTCTTTAAAAGATCATCAGCGAATTCACACAGGTGAAAAAACATATCTgtgcaaagaatgtggcaaatCCTTCAGTGTCAAGACCGACTTCAACAAGCATATGAGCACGACTCACCCAGATGCAAAACCGTACAATTGTCCAGTGTGCAAGGAATGTTTCAACACACCAGGCTCTCTGAAAATACATGGGAAAACTCATGGAGCGAATCCATGCATCTGTCCTGTGTGTAATAAATGCTTTAAGAGGCCACGCTACCTAAAGGAACACCAACAGAAGTTTCATGGTAGTGAGAAACCATACACGTGTGCGGTGTGCAGTAAAACCTTTTATAATGTAAGCCATTATAAAGTACATCAGAGAaatcacacaggggagaaacccttcaAGTGTCCTGTGTGTATTAAAAGCTTTACTAGCTCAGGCCTGTTAAAAATACATCAGGTAATTCATACAGGTGAGAAACCGCATAAGTGCAAAGAATGTGACAAATGCTTCTACCGCAAGGGACATCTGGTCAAGCATATGAGgactcacacaggggagaaaccgtaTGGTTGCCGTGAATGTGACAAATGCTTCACTCAAAGGTCATCATTAAAAGACCATATGAggattcacacaggggagaaaccgttTTGTTGCACTGAATGTGAGAAACGCTTCACTCAAAGGGCAACATTAAACGTGCATATGAagattcacacaggggagaaaccatatCAGTGTAAAGAGTGTGACAAATCTTTCAGTCAAAAACATGAACTGAGAAAGCATATGAgaattcacacaggggagaaatcatACAAGTGCCCTCTTTGTGAAAAATGCTTTAAATCATTGGGTGGTCTGAAACAACACGAGCTGAATCACTCTGGAGAGAAACCATCATATCTCTGCAGCGATTGTGGCAAAAGCTTCCGAACGATGAGTTACCTGAGGGTTCATATGAAgtctcacacagagacagaaccgGGGAGCCGGACAGAGAGCGAACCGGGGAGCCGGACAGAGAGCGAACCGGGGAGCCGGACAGAGAGCGAACCGGGGAGTCACAAAAAGAGAAGACTGCATATGTGTCCTGTATGTGGGAAAGGCTTTGCATATCCAAATGTTCTAAAAATCCACCAGCGAATTCACACTGGGGAGAAACCACATCAATGTCATGTTTGCAACAAAAGATTCATTCAGAAATGTGATCTGACTAGACATatgaggacacacacaggggagaaaagAAGAGAAAATCAATTAGAGAAACAGTTGTATCTTTGCAGTGATTGTGGCAAGTGCTTCCGGGAAAAACGTTATCTGAGAAAGCATATGAGAATTCACACCGAGAGAGATTCGGGAAATAAAACCGAGCGAGAGCTGCATAAGTGTCCTGTTTGTGGAAAAGGCTGTACGTCACTGAGTTATCTCAAAGACCACCAGGGAATtcacaccggagagaaaccgTATCTGTGCACTGTTTGCGGCAAAAGCTTCACTTGGAAGGGAGTCCTTAGAGAACACATGAAgactcacacaggggagaaatcaCATCAGTGCCATGTCTGCAGCAAAAGGTTCATTTATAGCAGAAAACTGTCACTTCACATGATgactcacacaggggagaagccatttAAGTGTTCTGTATGTGGGAAAGGTTTTACATCATCGGGTGATCTGACACGCCACAAGCgaattcacactggagagaaaccgtaTCGCTGCAACGATTGCAACAAATGCTTTAGTCAGATAAGTTCCCTTAAATCACACATGAAGAATATTcactgaacaacagtgtccatTGTGTAAAATGTCCGTTTTGAAGATAAAGGCTTATTCAAACTGACACCTGTAAGTGAACATACCCTCAGGTTTGATAATAACtgaattatactgtactgtaggtcctcACTTATGTGCTTTGTCACCTCTGGGTCTGCATGGCAAATTGCCCAGGAAAACACTCAAGGGCCATTCAGCCCTTCCTGACTATTGAAATGTGTGTTAGTGATGCTATTGCCTCCATGTTTGGTATCTCATAAACTTCTGAAGCAAACtttgatgtcatctatatgaatgTATGACCTGTGGTAACTTGTATCTGGACAGGGTGAACTTTAAGCTACTATGTGTTGTGATTTTATTGTCCTTAGGAATTCTGCCTTATTTGGTTTCATCCCCCACACAAGCCGTTAGACTCTGACACCCTGTGGATTTTGGGCCTGGGTGATCAGGTTACTGTAACTTGTTATGGTTGGATGGTTTAAGTCACCTTGAAATGTTAGAAAGGGAATGCCTTTTTTTCTGTCTGTTCCTCATGTCCTACGCTCTACAGAAAAGCTATATGAACATGTTTTTCTTGTAGGCTGCTCGGCCTGAGTAGGTCTGTTTTATGTCATGCTTTGCCTTTTAACTGTAAGATCCCAGCCCCTCcaatttttttctctcacacacaccggaTAGTTGCAGtgatatgtgttgttttacaaggtcagcaatagtagtacagcacccctggagcaaattagggttaagtgccttgctcatgggcaAAGACAGATTTTATATCTGGTATTCAAAACaacgacctttcggttactggcccaacgctctgaccactaggctaccttgccgccCCTGTCATATGCCTTGCCGCCCCTGTCATATGCCTTGTCACGCTTGTAAATGCTTTATAACTTAAGCTTCATGCCTGCGAATCGTTAAAGTTTTTACAATGTAGTTAAATCTATTTTCCTTGACAATTTTAATTCTGACATTTCTTGATTAGCCtattactgtaaaaaaaaaaaaatctaagtatATTCTCTATGGAATCAGATAATTCATTAAGATTATAAATTGTGAAGTCTTATCACAGGTCGCATGTgagatatttatatatatatatatatatatattatatgatcTGTATTATGTAATGGTTGTTACTTTTAAACCTTCAATAAATGTTTTTG

Function

NR:

description
zinc finger protein 665-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021591624.2 True 4046 mRNA 0.43 2 37729564 37737582

Neighbor

gene id symbol gene type direction distance location
LOC110510234 LOC106563797 coding downstream 13309 37670709 ~ 37716255 (-)
LOC118945268 NA coding downstream 60853 37665153 ~ 37668711 (-)
LOC110510233 LOC106563796 coding downstream 73012 37627521 ~ 37656552 (-)
LOC118945348 NA coding downstream 163749 37552571 ~ 37565815 (-)
nsrp1 nsrp1 coding downstream 230666 37482837 ~ 37498898 (-)
LOC110510236 LOC106563799 coding upstream 14326 37751908 ~ 37780139 (-)
LOC118945300 NA coding upstream 108465 37846047 ~ 37847952 (-)
LOC110509458 LOC106592337 coding upstream 422597 38160179 ~ 38237799 (-)
LOC110509387 LOC106563658 coding upstream 532311 38269893 ~ 38270880 (-)
LOC110510241 LOC106563658 coding upstream 559652 38297234 ~ 38298327 (-)
G2181312 NA non-coding downstream 58653 37665155 ~ 37670911 (-)
G2181369 NA non-coding downstream 70606 37658724 ~ 37658958 (-)
G2181272 NA non-coding downstream 189314 37538487 ~ 37540250 (-)
G2181301 NA non-coding downstream 197326 37531908 ~ 37532238 (-)
G2181418 NA non-coding upstream 55556 37793138 ~ 37793378 (-)
G2181420 NA non-coding upstream 60222 37797804 ~ 37798046 (-)
G2181319 NA non-coding upstream 84857 37822439 ~ 37824815 (-)
G2181428 NA non-coding upstream 99919 37837501 ~ 37837700 (-)
G2181304 NA other downstream 191324 37536665 ~ 37538240 (-)
LOC110510193 LOC106563731 other downstream 489771 37234793 ~ 37241163 (-)
G2181143 LOC100136155 other downstream 495665 37232869 ~ 37233899 (-)
G2180587 NA other downstream 746855 36981957 ~ 36982709 (-)
G2181315 NA other upstream 43000 37780582 ~ 37787673 (-)
G2182508 NA other upstream 1177024 38914606 ~ 38914926 (-)
G2182749 LOC106674859 other upstream 1222057 38959639 ~ 38960457 (-)
LOC110509389 NA other upstream 1621609 39359191 ~ 39370231 (-)

Expression


Co-expression Network