LOC110510241 (LOC106563658)


Basic Information

Item Value
gene id LOC110510241
gene name LOC106563658
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048593.1
NCBI id CM023247.2
chromosome length 47748341
location 38297234 ~ 38298327 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021591630.2
TGTGCGGAACCAGCTCAGCCATGACATTCCTCCGCAGGTTGCAATGGAACGACTCCTCCGTTCTAATCCATCCTCCAGGGTTCTACATCATCGGCTTCACCTCCCTGCCCTTTGTCAACCTCTATTTCATCTTCCTCACTTTCGTTTACGTGGTCTCGGTCGTGTTCAACACATGTGTGATCTATATAATATATGTGGACCTTCGCCTCCACAATCCCAAGTATATCGCGGTTGGTAACCTCGCGGTGGTTGATCTAGTGCTGAATACTTGCATTATTCCCGGTATGCTAAAGGCGTTTCTTGCTAAGAACAATTTTGTGCCGTTTAATCTGTGTATGGTACAGATGTATGTGTATTATTCCTTCATATGTATGGAATCGTTCTCCATCGCCGTGCTCGCCTATGACCGTATGATCGCCATATGTTTCCCTCTGAGGCACGGCTCCATCAACACCATGACGAGTATGTCGTGTATTCTTGGTGTCATCTGGTGCTTCTGTCTTGGTATACCGATATTCAGCACAGCCATTATGACCAGGCTGTCCTACTGCGATTCCGTTAATGTCTACAGCTATTTCTGTGATTACGCACCAGTGTTTCGGCTAGCATGTAACGACAACACCCTGCAATGGGCTGTGGCTTCAGTTCTGAGCCTGGTTATCCTCCTCGGCCCACTGTCCTTCATCATTCTGTCATACATGAGTATTCTAATCGCTGTGTTCAGGATGAAAAGCGTTGAGAGTCGTGTGAAAGCGCTGGCCACCTGCACTGAGCACCTCATTCTAGTGGCAGTATTCTTCTTTCCGGTTCTGATTATTTTCATGGTTGGGTTATTAGCGCGCATCAAACCAGACCCTGACCTGCGCGTACTGAGCCTGTCGCTGGCCTCGTGCATCCCGCCCTGTCTCAACCCCATCGTCTACTCTCTGAAAACTAAAGAGATCAAGAGCAAAGTGCTCACCATGTTCAGGAGAATTAAAGTTCAAGTAGTTAACGATTGATCTTTACGCATAGGTTGCTGCATAGGTTGCTACGTGCGTGAAGttaccatcaaatcaaatgtattgggcTGTCCAAGTCTATCAAGGGGTTGA

Function

NR:

description
olfactory receptor 2AT4-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021591630.2 True 1094 mRNA 0.47 1 38297234 38298327

Neighbor

gene id symbol gene type direction distance location
LOC110509387 LOC106563658 coding downstream 26354 38269893 ~ 38270880 (-)
LOC110509458 LOC106592337 coding downstream 59435 38160179 ~ 38237799 (-)
LOC118945300 NA coding downstream 449282 37846047 ~ 37847952 (-)
LOC110510236 LOC106563799 coding downstream 517095 37751908 ~ 37780139 (-)
LOC110510235 LOC106563798 coding downstream 559652 37729564 ~ 37737582 (-)
LOC110510112 LOC106563656 coding upstream 94210 38392537 ~ 38394321 (-)
LOC110510115 LOC106595428 coding upstream 150004 38448331 ~ 38454568 (-)
LOC110510113 LOC106563832 coding upstream 164340 38462667 ~ 38463617 (-)
LOC110509427 LOC106595428 coding upstream 172370 38470697 ~ 38477145 (-)
LOC110509428 LOC106563805 coding upstream 185060 38483387 ~ 38484577 (-)
G2181857 NA non-coding downstream 132244 38164603 ~ 38164990 (-)
G2181842 NA non-coding downstream 153552 38143483 ~ 38143682 (-)
G2181837 NA non-coding downstream 159501 38137523 ~ 38137733 (-)
G2181834 NA non-coding downstream 163008 38134027 ~ 38134226 (-)
G2181831 NA non-coding downstream 170051 38126835 ~ 38127183 (-)
G2181976 NA non-coding upstream 8341 38306668 ~ 38387483 (-)
G2181978 NA non-coding upstream 24467 38322794 ~ 38336103 (-)
G2181979 NA non-coding upstream 34507 38332834 ~ 38341677 (-)
G2181983 NA non-coding upstream 36468 38334795 ~ 38357161 (-)
G2181977 NA non-coding upstream 40114 38338441 ~ 38381749 (-)
G2181315 NA other downstream 509561 37780582 ~ 37787673 (-)
G2181304 NA other downstream 758994 37536665 ~ 37538240 (-)
nsrp1 nsrp1 other downstream 812584 37482837 ~ 37498898 (-)
LOC110510193 LOC106563731 other downstream 1057441 37234793 ~ 37241163 (-)
G2182508 NA other upstream 616279 38914606 ~ 38914926 (-)
G2182749 LOC106674859 other upstream 661312 38959639 ~ 38960457 (-)
LOC110509389 NA other upstream 1060864 39359191 ~ 39370231 (-)
G2183255 NA other upstream 1251026 39549353 ~ 39549869 (-)
G2183279 NA other upstream 1294660 39592987 ~ 39594345 (-)

Expression


Co-expression Network