LOC118945328


Basic Information

Item Value
gene id LOC118945328
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048593.1
NCBI id CM023247.2
chromosome length 47748341
location 38747130 ~ 38748239 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_005040487.1
ggtgcacctgtgtaatgatcgtgctgttaaatcagcttcttgatatgccacacctgtcaggtggatggattatcttggcaaagcagaaatgctcactaacggggatgaaaacaaagagagagaataagCTTTTCGTGCGTATGGAAAATCTTAGggatctttttatttcagctcatgaaacatgggaccaacactttacatgttgtgtttatatttttgttcagtTTAGTTAGTATAGCTACTGTAACTAGTATACTAGTTAGTTAGTGTAGCTACTGTAACTAGTATACTACTTAGTTAGTGTAGCTACTGTAACTAGTATACTAGTTAGTTAGTGTAGCTACTGTAACAAGTATACTAGTTAGTTAGTGTAGCTACTGTAACAAGTATACTAGTTAGTCATCACTGATGAACACTACTCACACAGATGTTATTATTGATCACTAAACTGTTGGATGTTATGTGTGCTTATAACCCAGTTCCACAGAAAGAgtcagtgtagtagtgtgtaggcgaaaatgtgtgtgtgtgtgtgtgtcatatttCATCTGGAGACACTAACCCTTCTTCAACTTAAGAGGCTCTACGTCTGGGGCGgtactgatttttttttttttttagtttttaaaaACTTCATCTCATTCCTTTGCTTTAGTAATGTAATTTTAATTTATATGAATTGTACGAATGTTACGATTCACATTCCTGAATGTTTTAAGTGAAAAGGAAAATGGAATCTTGTCATTGTGTTTTTATTGTCTGAAGTTTTGGAAACACTGGAGAAGTAACAGAGCTGTAGTATGGCTGTATGTCTGAGTCCAAAATGGGACCCTATCGCCTATGTACTGCTTTACATATGACCGGCTCCCATCCCATAGGGACaacaagtagtgcactgtatagggaatacaGCCATTTAGGACAGAGTCCTATGGGTTTTTCAAGTAGGCCTAAGACCAAGTCTAGTACAGCACAGGTACAGAGTTGTGAATTAGAGGAGCTAGGCTACCTCACTGTTTGGTGTTTTCACATGTCATTTGTCATTGATCAAAACGAGAATATTAAAGTGTTGACAGATA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005040487.1 True 1079 mRNA 0.37 2 38747130 38748239

Neighbor

gene id symbol gene type direction distance location
LOC110515723 ubl3 coding downstream 40113 38655627 ~ 38707017 (-)
LOC110509428 LOC106563805 coding downstream 262553 38483387 ~ 38484577 (-)
LOC110509427 LOC106595428 coding downstream 269985 38470697 ~ 38477145 (-)
LOC110510113 LOC106563832 coding downstream 283513 38462667 ~ 38463617 (-)
LOC110510115 LOC106595428 coding downstream 292562 38448331 ~ 38454568 (-)
katnal1 katnal1 coding upstream 1624 38749863 ~ 38776669 (-)
hmgb1a hmgb1 coding upstream 34846 38783085 ~ 38789254 (-)
trnae-uuc-62 NA coding upstream 57343 38805582 ~ 38805653 (-)
trnae-uuc-63 NA coding upstream 73303 38821542 ~ 38821613 (-)
LOC110510245 medag coding upstream 79817 38828056 ~ 38832534 (-)
G2182345 NA non-coding downstream 19728 38721579 ~ 38727402 (-)
G2182337 NA non-coding downstream 30596 38690566 ~ 38716534 (-)
G2182336 NA non-coding downstream 58536 38686650 ~ 38688594 (-)
G2182334 NA non-coding downstream 61469 38685176 ~ 38685661 (-)
G2182333 NA non-coding downstream 61745 38684757 ~ 38685385 (-)
G2182392 NA non-coding upstream 60280 38808519 ~ 38809830 (-)
G2182402 NA non-coding upstream 85266 38833505 ~ 38833898 (-)
G2182477 NA non-coding upstream 134933 38883172 ~ 38884568 (-)
G2182498 NA non-coding upstream 157857 38906096 ~ 38906421 (-)
G2182506 NA non-coding upstream 161914 38910153 ~ 38910442 (-)
LOC110509458 LOC106592337 other downstream 572828 38160179 ~ 38237799 (-)
G2181315 NA other downstream 959457 37780582 ~ 37787673 (-)
G2181304 NA other downstream 1208890 37536665 ~ 37538240 (-)
nsrp1 nsrp1 other downstream 1262480 37482837 ~ 37498898 (-)
LOC110510193 LOC106563731 other downstream 1507337 37234793 ~ 37241163 (-)
G2182508 NA other upstream 166367 38914606 ~ 38914926 (-)
G2182749 LOC106674859 other upstream 211400 38959639 ~ 38960457 (-)
LOC110509389 NA other upstream 610952 39359191 ~ 39370231 (-)
G2183255 NA other upstream 801114 39549353 ~ 39549869 (-)
G2183279 NA other upstream 844748 39592987 ~ 39594345 (-)

Expression


Co-expression Network