LOC110509389


Basic Information

Item Value
gene id LOC110509389
gene name NA
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048593.1
NCBI id CM023247.2
chromosome length 47748341
location 39359191 ~ 39370231 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021590285.2
GATGAAGCAGTCTGAAGTAAAAGACAAATGGCAAGAGGGAGAAGACAAAATCGATACATGAAGAAACTGTTCATCCTTCGAGGTTTGCCAGGAGTTGGAAAGACAACGATGGCAGAAAAACTCTGGGACAAACATGCAAGACTTGGACTGAAAGGAGAAATTTTCTCCGCTGACAGGTACCATGAAAGAACCAACTACACCAAAGGAAACTTTCAACGCAGCCATCAGCAGAATAGAGAGgatgTTTTTAAAGCCATGAACAGAGGTGTGGATCCGATCATCGTTGACAACACAAACATTTCTCTTTGGGAGATGTGGCCCTATATCCACATGgGGATTGGACAGAAGAACTATTACATCAGAATGATGGAACTGCCTAAAATCTCCATCAACAAGCTGTACAGACGGTGTCGTGGTAAAATCCCCAAACGTAAGTTCAGGTCCTTTGAGGTTCGCTGGAAAAAAGCTGACAGCATCTGGCATGTACTTAACGACGGCTACTCCAAAAAACGCTGGAAGAGAAGCAAAGAGGAATGGAAcgtccagtgatgaagacatgctGGTCTTCTCCCCACCCCAAAGTCTCCAAAATACGGAACAAATTCaccggggtggcagggtagcctagtggttagagcgttggactagtaaccggaaggttgcaagttcaaaccccc
>TU2495799
GGGAGGGCGTGTCTTGTAAACAGAGTACAGCTGCCGTTGTGCTGTGTACTGTAGTTGGTGATGAAGCAGTCTGAAGTAAAAGACAAATGGCAAGAGGGAGAAGACAAAATCGATACATGAAGAAACTGTTCATCCTTCGAGGTTTGCCAGGAGTTGGAAAGACAACGATGGCAGATTTTTAAAGCCATGAACAGAGGTGTGGATCCGATCATCGTTGACAACACAAACATTTCTCTTTGGGAGATGTGGCCCTATATCCACATGAAGAACTATTACATCAGAATGATGGAACTGCCTAAAATCTCCATCAACAAGCTGTACAGACGGTGTCGTGGTAAAATCCCCAAACGTAAGTTCAGGTCCTTTGAGGTTCGCTGGAAAAAAGCTGACAGCATCTGGCATGTACTTAACGACGGCTACTCCAAAAAACGCTGGAAGAGAAGCAAAGAGGAATGGAAcgtccagtgatgaagacatgctGGTCTTCTCCCCACCCCAAAGTCTCCAAAATACGGAACAAATTCaccggggtggcagggtagcctagtggttagagcgttggactagtaaccggaaggttgcaagttcaaacccccgagcttaacaggcagttaacccactaggtcgtcattgaaaataagaatgtgttcttaactgacttgcccagttaaat

Function

NR:

description
NEDD4-binding protein 2-like 1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021590285.2 False 677 mRNA 0.46 5 39367292 39370172
TU2495799 True 673 TUCP 0.46 5 39359191 39370231

Neighbor

gene id symbol gene type direction distance location
LOC110509390 n4bp2l1 coding downstream 58933 39293759 ~ 39308359 (-)
LOC110510245 medag coding downstream 534758 38828056 ~ 38832534 (-)
trnae-uuc-63 NA coding downstream 545679 38821542 ~ 38821613 (-)
trnae-uuc-62 NA coding downstream 561639 38805582 ~ 38805653 (-)
hmgb1a hmgb1 coding downstream 578038 38783085 ~ 38789254 (-)
fryb LOC103354091 coding upstream 3792 39373049 ~ 39621811 (-)
LOC110510249 LOC106563843 coding upstream 896471 40266643 ~ 40267461 (-)
LOC110510250 sertm1 coding upstream 946354 40316526 ~ 40328236 (-)
LOC110510252 LOC106563841 coding upstream 1003004 40373176 ~ 40410046 (-)
dclk1a LOC106604030 coding upstream 1073541 40443713 ~ 40672017 (-)
G2183193 NA non-coding downstream 51239 39315485 ~ 39316053 (-)
G2182988 NA non-coding downstream 67064 39299595 ~ 39300228 (-)
G2182985 NA non-coding downstream 75411 39291025 ~ 39291881 (-)
G2182966 NA non-coding downstream 82361 39284678 ~ 39284931 (-)
G2182964 NA non-coding downstream 83225 39283819 ~ 39284067 (-)
G2183208 NA non-coding upstream 29911 39400083 ~ 39401096 (-)
G2183211 NA non-coding upstream 43993 39414165 ~ 39414725 (-)
G2183241 NA non-coding upstream 149048 39519220 ~ 39525136 (-)
G2183262 NA non-coding upstream 190471 39560643 ~ 39563240 (-)
G2182749 LOC106674859 other downstream 406835 38959639 ~ 38960457 (-)
G2182508 NA other downstream 452366 38914606 ~ 38914926 (-)
LOC110509458 LOC106592337 other downstream 1192990 38160179 ~ 38237799 (-)
G2181315 NA other downstream 1579619 37780582 ~ 37787673 (-)
G2181304 NA other downstream 1829052 37536665 ~ 37538240 (-)
G2183255 NA other upstream 179181 39549353 ~ 39549869 (-)
G2183279 NA other upstream 222815 39592987 ~ 39594345 (-)
G2183291 NA other upstream 360082 39730254 ~ 39732847 (-)
G2183340 LOC106593185 other upstream 376000 39746172 ~ 39748476 (-)
G2183457 NA other upstream 592256 39962428 ~ 39965903 (-)

Expression


Co-expression Network