Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC118945309 |
| gene name | NA |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048593.1 |
| NCBI id | CM023247.2 |
| chromosome length | 47748341 |
| location | 42734257 ~ 42740444 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XR_005040450.1 | True | 431 | mRNA | 0.57 | 3 | 42734257 | 42740444 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110509472 | LOC106563882 | coding | downstream | 127182 | 42162163 ~ 42661980 (-) |
| dchs1b | LOC105011153 | coding | downstream | 234478 | 42257886 ~ 42499779 (-) |
| arfip2b | arfip2 | coding | downstream | 598305 | 42077453 ~ 42135952 (-) |
| fhdc3 | LOC106563862 | coding | downstream | 667937 | 42043930 ~ 42066320 (-) |
| trim3b | LOC105011155 | coding | downstream | 698059 | 41894749 ~ 42036198 (-) |
| eva1c | LOC106563889 | coding | upstream | 9481 | 42749925 ~ 42775546 (-) |
| bach1b | bach1 | coding | upstream | 709884 | 43450328 ~ 43470242 (-) |
| map3k7cl | map3k7cl | coding | upstream | 737746 | 43478190 ~ 43513478 (-) |
| cadm2a | cadm2 | coding | upstream | 1074185 | 43814629 ~ 44580847 (-) |
| LOC110509396 | LOC106594559 | coding | upstream | 2143993 | 44884437 ~ 44890751 (-) |
| G2185870 | synj1 | non-coding | downstream | 13285 | 42697647 ~ 42720972 (-) |
| G2185860 | synj1 | non-coding | downstream | 26127 | 42680574 ~ 42708130 (-) |
| G2185874 | NA | non-coding | downstream | 27992 | 42705949 ~ 42706265 (-) |
| G2185868 | NA | non-coding | downstream | 33743 | 42699590 ~ 42700514 (-) |
| G2185863 | NA | non-coding | downstream | 43632 | 42689784 ~ 42690625 (-) |
| G2185883 | NA | non-coding | upstream | 4053 | 42744497 ~ 42744892 (-) |
| G2185885 | NA | non-coding | upstream | 5391 | 42745835 ~ 42746164 (-) |
| G2185896 | NA | non-coding | upstream | 7498 | 42747942 ~ 42749815 (-) |
| G2185902 | NA | non-coding | upstream | 32424 | 42772868 ~ 42774624 (-) |
| G2185525 | LOC106563877 | other | downstream | 881251 | 41852200 ~ 41853006 (-) |
| G2185427 | NA | other | downstream | 1138328 | 41595652 ~ 41595929 (-) |
| LOC110509471 | LOC106563870 | other | downstream | 1223856 | 41502509 ~ 41530610 (-) |
| sparta | spg20 | other | downstream | 2007243 | 40709409 ~ 40727062 (-) |
| ccdc169 | LOC106563839 | other | downstream | 2025171 | 40697812 ~ 40709293 (-) |
| G2186010 | NA | other | upstream | 225365 | 42963371 ~ 42984016 (-) |
| G2186492 | grik1 | other | upstream | 661169 | 43401613 ~ 43403275 (-) |
| G2186532 | cct8 | other | upstream | 785308 | 43525752 ~ 43526754 (-) |
| G2186529 | cct8 | other | upstream | 792481 | 43532925 ~ 43536669 (-) |
| G2186630 | NA | other | upstream | 939508 | 43679952 ~ 43680591 (-) |
