eva1c (LOC106563889)


Basic Information

Item Value
gene id eva1c
gene name LOC106563889
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048593.1
NCBI id CM023247.2
chromosome length 47748341
location 42749925 ~ 42775546 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036968124.1
gagagagagagagagagagagagaggggcgagcccCCGAACATGATCTCACGGAGCGGGAATGCGAGGAGCCATGAGCTGGTCGGGTTCCCACGGCGGGCTGAGCTGCTCTGGAGCCGGGATTAACCTGGTCTACCTCTCGCTGCTGCTCTGGAGCTCCTGCTCTGGCATGGACGGACTGGCTGATTTCTCAAAATACCTGTCCCGGATCATTACCAGTCACTCTGTGCATGCGTGCGACGGGCAGCAAGTACGTCTCTACTGTCCACGCCACTCCACCATCTCTATCCAGTCGGCGTTTTACGGACGTGCCGACGCAAGCCTCTGCACCAATGGGACGGCTGCGGGTGTCAGAGCGGCAAACTACAGCTGTTCCGCGTTTACGACCTTACAGAAGTTACTGTCAGAGTGTCAGAGCCACAGAGACTGTCAGCTACCTGTCAATCACCTGGTGTTTGGGCCCGACCCCTGTCCTGGGACCATCAAGTACCTCCACGTCACCTACAAGTGTAAACCTAcTGAGCATAAGAGCAGTgtggtgtgtgagggagagaagcTGACGTTACACTGTAAGCCTCCCAGAGTGCTGATCATCTATACAGCTGCTTACGGTAGGGGTCTGGGCCACACCTGTCCCTCACAGGACAGAGGAACACCCCCGTTTGagtgtttgAACCACAATGCGGTTCACACTCTGTCACAGAGCTGCTACAGCAAACAGAGGTGTGTTGTCGCCGTAGACAACCAGACCTTCAGAGACCCCTGCTACCCTGGAACCAGGAAGTACCTGACTGTCCTCTACTCCTGTGTACCACAGACATTACTGCAGGAAGCAGACCCAGGTGTACTACACAGACCCACCTCACACCCAAAAGCCCACCCTGGTCCTCCCCCAGCCCACCCTGGTCCTCCCCCAGCCCAACCAGATCCTCCCCCAGCCCACCCCGGTCCTCCCCCAGCCCACCCTGGTCCTGCAGATGTGGCTGTCTATCCTAAGGACTCCAGAACACCAGGAAACACAGGAGTCATGATGAGTAACTCTGTTATGACTTACTCCTATATTAAAgagcaCCCAGAGACTGCGGCGTTGTTGTTcacctccagtgtgtgtgttggtctgctACTCACCCTGCTGGCTGTGTCTATCAGACTGACCTGTAGGGGGCTCcgccacacacacaaaacacaaacacgCAGGAgccaggaagaggaggatgatgatgatgatgaagaagaggaggagatgactgACTGCTCGCTGCTGTCGGACTCAGACAGGCAGCTGGCTTACTGCTGGGAGGAAGTGAGCTACAGGACAGCGGACGCGGAGAGGCTAGAACGCATGGAGAGGAGGGACATGGTGATCCAGGAGATCTGGATGAACTCTGATCTCTACGGGACGTCCTGTGATCAGGACCAGACTCCTTATTTACCACTCAGTTACACACAGCTGGAGTAACAGAACCAGACTCCTTATTTACCACTCAGTTACACAGCTGGAGTAACAGAACCAGACTCCTTATTTACCACTCAGTTATACACAGCTGGAGTAACAGAACCAGACTCCTTATTTACCACTCAGTTATACACAGCTGGAGTAACAGAACCAGACTCCTTATCTACCACTCAGTTATACACAGCTGGAGTAACAGAACCAGACTCCTTATCTACTACTCAGTTATACACAGCTGGAGTAGGTTTTAGGTGTGATTTATTCACAGGTAAGAACACATGTTAAAGACCAAAACAGTGCAGATATAGAACATATGAAAACACCACTTGGAAAGCCAAAAGGACTGATATGTTGATAAACAACATACAAATAGAAGTCCAAAAAAACCAGTTAAACAGAACATACTAATTATAATTATGTACATATTTATATACTCAGTAtacaagaaaaaaacatgtttgattatatgtgtgtgtgtgtgtgtgagagagagttatttttttacctttaccttcagactaggcaagtcagttaagaa
>TU2499195
CACTCAGTTACACACAGCTGGAGTAACAGAACCAGACTCCTTATTTACCACTCAGTTACACAGCTGGAGTAACAGAACCAGACTCCTTATTTACCACTCAGTTATACACAGCTGGAGTAACAGAACCAGACTCCTTATTTACCACTCAGTTATACACAGCTGGAGTAACAGAACCAGACTCCTTATCTACCACTCAGTTATACACAGCTGGAGTAACAGAACCAGACTCCTTATCTACTACTCAGTTATACACAGCTGGAGTAGGTTTTAGGTGTGATTTATTCACAGGTAAGAACACATGTTAAAGACCAAAACAGTGCAGATATAGAACATATGAAAACACCACTTGGAAAGCCAAAAGGACTG

Function

NR:

description
PREDICTED: protein eva-1 homolog C isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036968124.1 False 1990 mRNA 0.51 8 42749925 42775546
TU2499195 True 366 lncRNA 0.41 1 42750117 42750482

Neighbor

gene id symbol gene type direction distance location
LOC118945309 NA coding downstream 9481 42734257 ~ 42740444 (-)
LOC110509472 LOC106563882 coding downstream 142850 42162163 ~ 42661980 (-)
dchs1b LOC105011153 coding downstream 250146 42257886 ~ 42499779 (-)
arfip2b arfip2 coding downstream 613973 42077453 ~ 42135952 (-)
fhdc3 LOC106563862 coding downstream 683605 42043930 ~ 42066320 (-)
bach1b bach1 coding upstream 674782 43450328 ~ 43470242 (-)
map3k7cl map3k7cl coding upstream 702644 43478190 ~ 43513478 (-)
cadm2a cadm2 coding upstream 1039083 43814629 ~ 44580847 (-)
LOC110509396 LOC106594559 coding upstream 2108891 44884437 ~ 44890751 (-)
LOC110510296 LOC106563931 coding upstream 2318872 45094418 ~ 45115616 (-)
G2185896 NA non-coding downstream 110 42747942 ~ 42749815 (-)
G2185885 NA non-coding downstream 3761 42745835 ~ 42746164 (-)
G2185883 NA non-coding downstream 5033 42744497 ~ 42744892 (-)
G2185870 synj1 non-coding downstream 28953 42697647 ~ 42720972 (-)
G2185860 synj1 non-coding downstream 41795 42680574 ~ 42708130 (-)
G2185904 NA non-coding upstream 4975 42780521 ~ 42780769 (-)
G2185912 NA non-coding upstream 13988 42789534 ~ 42791168 (-)
G2185929 NA non-coding upstream 40826 42816372 ~ 42816679 (-)
G2185930 LOC106563892 non-coding upstream 42554 42818100 ~ 42818377 (-)
G2185935 NA non-coding upstream 51136 42826682 ~ 42826883 (-)
G2185525 LOC106563877 other downstream 896919 41852200 ~ 41853006 (-)
G2185427 NA other downstream 1153996 41595652 ~ 41595929 (-)
LOC110509471 LOC106563870 other downstream 1239524 41502509 ~ 41530610 (-)
sparta spg20 other downstream 2022911 40709409 ~ 40727062 (-)
ccdc169 LOC106563839 other downstream 2040839 40697812 ~ 40709293 (-)
G2186010 NA other upstream 190263 42963371 ~ 42984016 (-)
G2186492 grik1 other upstream 626067 43401613 ~ 43403275 (-)
G2186532 cct8 other upstream 750206 43525752 ~ 43526754 (-)
G2186529 cct8 other upstream 757379 43532925 ~ 43536669 (-)
G2186630 NA other upstream 904406 43679952 ~ 43680591 (-)
G2185902 NA non-coding upstream 22386 42772868 ~ 42774624 (-)

Expression


Co-expression Network