bach1b (bach1)


Basic Information

Item Value
gene id bach1b
gene name bach1
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048593.1
NCBI id CM023247.2
chromosome length 47748341
location 43450328 ~ 43470242 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036967729.1
GTCATATGACTTGTGGTTCCGCAGAATTGGGTACAGTCATTTACAGTTGTCAACCACAGTCCAAGTTTCCGTCCCGACGTTTAAACCGTGTTCGGGAGGTTCTCACACGGAATATGTCAGCCTCATAAACCTGTTTAGGATTTCAGCTCACCGTCGTCCTAGGATAACCAATGTCAGaTGTCTGTTGCCATGTCTAGTCTGGAGAGCCTGCGGTCCTCTGTGTTTACCTTTGAGTCCTCCGTGCACAGCTGCCATGTGCTGCGTTGTCTGGACGACCAGCGGAGGCGTGACCTGCTGTGTGACATCACTGTGCTGGCCGAAGGGAGGAGTTTCAGGGCCCACCGTTCTGTGCTGGCCTCCTGCAGCGACTACTTCACACACAGGGTCTCCTCCCACGCACCACAGGGACTTGTCGTCACCCTGCCTCaggagGTGACGGTGAGTGGCTTGGAGCCCCTGCTGCAGTTTGCCTACACGTCCAAGCTGCTCTTCAGTAAAGATAATGTCATGGAGATACGACACTGTGCCTCTATTCTGGGTTTCAGGGATCTGGACTCGGCCTGTTTTGACTTCCTCCTGCCCAAGTTCTTCAGCAGCAGTTCGCCCTCCTTCCAGAGGAAGACCTGCTGTAAGACACGGTGCAGGAGACAGTCCCCCGGGTCAGAGCTCAGCAACATCGACACGAACAAGGATGTCTTAGACGATGACAAAGGGGTCCGGGTGGTTTCTGATTCGCCCGTTGAACAGGATGTGGGTGGACAACCAGCAAATGACGAGACGGGACGTAAAAGCAAATATCTCACACCTCCTCCTGAAGCCGATATCCAATCAGACGGCCAGACTGACTACTCCCTACAGTGCCCCAAGTACCGCAAGTTCCAGCAGGCTTGTGGGAAGGTGAGGCCGTGCGTGGAGATCTGTGTCCCAGAAACAAACCATGACTCCccagtggggagagaggagggctgcCCTCTACCCCTGCACCTTCCCACGTCCGTGCGACCCTGTTCCAGTGGTGTAGGATTTAGGGAAGGTCCTGCGGTGGAGACGTCTTCTGGAGAAAACTATTCACttctctcacagacacagactgaccaggcaggacagggagaggtggagCAGAGGACTGACCAGgcaggacagggagaggtggagCAGAGGACTGACCAGgcaggacagggagaggtggagCAGAGGACTGACCAGgcaggacagggagaggtggagCAGAGGACTGACCAGgcaggacagggagaggtggagCAGAGGACTGACCAGgcaggacagggagaggtggagCAGAGGACTGACCAGgcaggacagggagaggtggagcagaggactggagaagaggatgatgaggagaagagagagacgaatgaggggaagagaaagatggacgagagaaggagagaggagaggaggagaggagagacagaagagaggaggagaggagagacagaagagaggagcagaggagaaacagaagaaaggaggagaggagagacagaagagaggaggagaggagagagggcttcTGGAGTTGACTGTCACAGCTCTGTCCTTCCTCTCGTGGAGGTGTCTAGTGGTCGGCTTGTCAGCTGTGAAGAGAGCCCAGGGTTGGGTACAGCACCACACCGATGTCCCTTGGAGGTACCCGGGCTGGACAAGCAGAGCCCTGGAGGTGTGGGGGAAGGAGGTTGTGTTCTAGGGGGTAGAGGACACCATGAAGGGATAGATTCAGGTGTCTCCTGCCTGCCACAGACAGAacaggagcagggagagagagcgaggagaaagGTGGGGAGAAGGATAGAACATGGAAGAAGTGAAAgcggagcaggagagaggagagagcgaggatgGGAAGAGAGGAGCAGTGTGGAAAGAGAGGTGGCTGAACACTTGGCCCATGGCCTCTGGTCAGagctcccctcttctcctcccctcctccaggaCTTCCCTGCGACTGAGTCTGGGAACCTCCGGAGCAGCAGCTCCACCTTGGACTGGCTTCACCAGCTTGACATCAGCTCCAGTACCGGGGACTGTCCCTTCCTCCACGGCTTGGACAGGGAGACAGACggagggacggacagagggacaggggaggggaCGGACAGTGGGACAATGAGCGCGACTGGGCTGGGGTGCGAGGGGTCGTCCCAGTTAGAGAAGAGTCCCTGTGTGTCCTCCCTGACATCTGGAGACGATGGAGACTCCGACTGCTTCGATACGGAGGGAGACAGCGAGTCCTGTTCCTACAGCCAGAGAGTCAGGGAGGTGCAGCTGCCGTTCTCTGTGGGTCGTATCGTGGGGTTGAGCAGGAATGACTTCCAGCTGATGCTGAGGCACCAGACTCTGACCCGAGAACAGCTGGACTTTGTCCACGACGTCAGACGCAGGAGTAAGAACCGTATCGCGGCGCAGCGCTGTCGCAAGAGGAAGCTGGACTGTATACACAATCTGGAGTGTGAGATAGACAAACTGaGGACAGAGAAGAACCAGCTGATATCAGAGAGGAGCCATCTGAACCAGATGAAGCTGAATACTTGGCACAGTGTGTCCGCTCTTTGTCAGAGAGTCTGCAGCGAGGCCGCCCTGAGACCAGAACAACTCCAGGTCCTAGCCAAGTACTCCTCCCCAGACTGCCCGCTCTCTGCTCTCATCTCCCCTACAGACCCAACCTCCCCTGGGCTAGGAGGACTACTACAATCCCAGGCCTCTCCCTAGGCCTGCTCCTCCTCAGGCCTAGCCTCAGATACCTGTCAGAACCCTTCGGAACCTTCGGAACCCTCGGCCAGCTGCTCCAGGGACACACCCACAGGGGAGGAGCACTCAGGTGATTGAACAAGCCCTCAGGTATATACAGCTGTGTGATCAGTTGACTTGGATGCCCTGCCCACGGTTGAGTGTGAGTCTGGACAccttcatcatcgtcatcatcaccaTTTCATAGACTTTCTTCTACAGGCAAAGACACTGTGGTTGTGTTCCAATAATCTCTCCTTCCTCAGAGGTGCGCTCGGTTACTCACTAAAGCATCAGATTGGTGTAGGCACTGAGCAGGGATGAATGAAACAGGAGAGTATTTTCCCGCTATTGACACGGTTACATAGAAGCtgacagtatttcaaccacatgaaAATATGCATGCAAGATGAACTGAAATCTACCACCAGAgataaactctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtacagtaccagttttgagc

Function

symbol description
bach1 Enables DNA-binding transcription repressor activity, RNA polymerase II-specific. Involved in DNA repair and regulation of transcription, DNA-templated. Located in nucleus. Colocalizes with cytosol.

NR:

description
PREDICTED: spore wall protein 2-like

GO: NA

KEGG:

id description
K09042 BACH; transcription regulator BACH

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036967729.1 True 3281 mRNA 0.56 6 43450328 43470242

Neighbor

gene id symbol gene type direction distance location
eva1c LOC106563889 coding downstream 674782 42749925 ~ 42775546 (-)
LOC118945309 NA coding downstream 709884 42734257 ~ 42740444 (-)
LOC110509472 LOC106563882 coding downstream 843253 42162163 ~ 42661980 (-)
dchs1b LOC105011153 coding downstream 950549 42257886 ~ 42499779 (-)
arfip2b arfip2 coding downstream 1314376 42077453 ~ 42135952 (-)
map3k7cl map3k7cl coding upstream 7948 43478190 ~ 43513478 (-)
cadm2a cadm2 coding upstream 344387 43814629 ~ 44580847 (-)
LOC110509396 LOC106594559 coding upstream 1414195 44884437 ~ 44890751 (-)
LOC110510296 LOC106563931 coding upstream 1624176 45094418 ~ 45115616 (-)
LOC118945272 NA coding upstream 1637978 45108220 ~ 45112955 (-)
G2186510 NA non-coding downstream 21331 43428297 ~ 43428997 (-)
G2186502 LOC105026052 non-coding downstream 31448 43412952 ~ 43418880 (-)
G2186507 NA non-coding downstream 33272 43416754 ~ 43417056 (-)
G2186498 NA non-coding downstream 40109 43408407 ~ 43410219 (-)
G2186491 NA non-coding downstream 49657 43398025 ~ 43400671 (-)
G2186537 NA non-coding upstream 14850 43485092 ~ 43485378 (-)
G2186539 NA non-coding upstream 19394 43489636 ~ 43489937 (-)
G2186543 NA non-coding upstream 41377 43511619 ~ 43511900 (-)
G2186544 NA non-coding upstream 43326 43513568 ~ 43513909 (-)
G2186529 cct8 non-coding upstream 64329 43532925 ~ 43536669 (-)
G2186492 grik1 other downstream 47053 43401613 ~ 43403275 (-)
G2186010 NA other downstream 466312 42963371 ~ 42984016 (-)
G2185525 LOC106563877 other downstream 1597322 41852200 ~ 41853006 (-)
G2185427 NA other downstream 1854399 41595652 ~ 41595929 (-)
LOC110509471 LOC106563870 other downstream 1939927 41502509 ~ 41530610 (-)
G2186532 cct8 other upstream 55510 43525752 ~ 43526754 (-)
G2186630 NA other upstream 209710 43679952 ~ 43680591 (-)
G2186662 NA other upstream 254917 43725159 ~ 43726847 (-)
G2186701 NA other upstream 321626 43790416 ~ 43793647 (-)

Expression


Co-expression Network