LOC118945278


Basic Information

Item Value
gene id LOC118945278
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048593.1
NCBI id CM023247.2
chromosome length 47748341
location 45464750 ~ 45466196 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_005040393.1
tatagtccactattattatatagtctcctagtccctatgtagtccactattattatatagtcccctattccctatgtcgtccactattattatatagtcccctattccctatgtagtcccCTATGATATAGTCCACTATTATTATATAGTCCCCTATTCCCTGTCGTCCACTATTATTATAtagtcccctattccctatgtcgtccactattattatatagtcccctattccctatgtagtccactattattatatagtccactattattatatagtcccctactccctatgtagtccactatTATTAGATAGTACCCTATTATATAGTCCACTATTATTATGTAGTCCACTATTATTATAtagtcccctattccctatgtagtccactgttattatatagtcccctactccctatgtagtccactatTATATAGTCCActgtatagggactagggtgccgtTAGGGACTCAGTCTGGGTATTTAACAATGGCTGCTCCAGGCATGCTGACTCATCAGAACTATACTAGACGTTAAACTCTTCATGTGAGGAACATTATGCATTGTGTTTAGATGAGCAGGATACCAGGTGAAACATTGTGTTTAGATGAGCAGGATACCAGGTGAAACATTGTGTTTAGATGAGCAGGATACCAGGTGAAACATTGTGTTTAGATGACCCCAGGATACCAGGTGAAACATTGTGTTTAGATGACCAGGATACCAGGTGAAACATTGTGTTTAGATGAGCAGGATACCAGGTGAAACGTTGTGTTTAGATGAGCAGGATACCAGGTGAAACATTGTGTTTAAATGACCCCAGGATACCAGGTGAAACATTGTGTTTAGATGACCCCAGGATACCCGGTGAAACATTGTGTTTAGATGAGCAGGATACCAGGTGAAACATTGTGTTTAGATGAGCAGGATACCAGGTGAAACATTGTGTTTAGATGAGCAGGATACCAGGTGAAACATTGTGTTTAGATGAGCAGGATACCAGGTGAAACATTGTGTTTAGATGAGCAGGATACCAGGTGAAACATTGTGTTTAGATGAGCAGGATACCAGGTGAAACATTGTGTTTAGATGAGCAGGATACCAGGTGAAACATTGTGTTTAGATGACCAGGATACCAGATGAAACATTGTGTTTAGATGACCAAGATACCGGTGAAACATTGTGTTTAGATGACCAGGATACCAGGTGAAACATTGTGTTTAGATGACCAGGATACCAGGTGAAACATTGTGTTTAGATGAGCAGGATACCAGGTGAAACATTGTGTTTAGATGAGCAGGATACCAGGTGAAACATTTGCCTGAAGACTCAAACTGAATTCTCCCTCTATGTACTCTACacacttcagtctgagactgctGTCATTGAATTAGTTTGTGCTGACAAAACGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005040393.1 True 1411 mRNA 0.40 2 45464750 45466196

Neighbor

gene id symbol gene type direction distance location
stoml3b stoml3 coding downstream 3063 45431236 ~ 45461687 (-)
paxbp1 paxbp1 coding downstream 289345 45120082 ~ 45175405 (-)
LOC110510296 LOC106563931 coding downstream 349134 45094418 ~ 45115616 (-)
LOC118945272 NA coding downstream 351795 45108220 ~ 45112955 (-)
LOC110509396 LOC106594559 coding downstream 573999 44884437 ~ 44890751 (-)
proser1 proser1 coding upstream 1115 45467311 ~ 45495435 (-)
smpd1 smpd1 coding upstream 202061 45668257 ~ 45689589 (-)
LOC118945350 NA coding upstream 277420 45743616 ~ 45760571 (-)
si:ch1073-15f19.2 NA coding upstream 302536 45768732 ~ 45780271 (-)
LOC110510923 LOC103354503 coding upstream 338672 45804868 ~ 46118068 (-)
G2188303 NA non-coding downstream 26104 45436781 ~ 45438646 (-)
G2188301 NA non-coding downstream 31559 45432883 ~ 45433191 (-)
G2188294 NA non-coding downstream 52638 45411798 ~ 45412112 (-)
G2188249 NA non-coding downstream 61389 45309286 ~ 45403361 (-)
G2188279 NA non-coding downstream 81530 45381399 ~ 45383220 (-)
G2188338 NA non-coding upstream 57553 45523749 ~ 45524676 (-)
G2188321 NA non-coding upstream 70250 45536446 ~ 45537510 (-)
G2188359 NA non-coding upstream 96912 45563108 ~ 45564851 (-)
G2188367 NA non-coding upstream 117862 45584058 ~ 45590590 (-)
G2188368 NA non-coding upstream 118900 45585096 ~ 45591081 (-)
G2188287 NA other downstream 65204 45397476 ~ 45399546 (-)
G2188280 NA other downstream 73606 45390142 ~ 45391144 (-)
G2188420 NA other upstream 336759 45802955 ~ 45804187 (-)
G2188877 NA other upstream 615190 46081386 ~ 46084784 (-)
G2188868 chordc1 other upstream 677123 46143319 ~ 46157806 (-)
G2189115 NA other upstream 1168042 46634238 ~ 46636168 (-)

Expression


Co-expression Network