rskrb (LOC106563969)


Basic Information

Item Value
gene id rskrb
gene name LOC106563969
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048593.1
NCBI id CM023247.2
chromosome length 47748341
location 47025620 ~ 47060435 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036967807.1
TGTAGAGGTGACGTGACCTACAGAAGGGATTATTTTGTTTATGTCGCCTAATCTGCTCTGTCTGCTATCGACGACGACAACACGGTGGAAGACTTTAGGAAGTACTAGCTACTAATGTTTTACCTACCGACGGCTGGCCATAGTGTAGTCGCCGGGGCACAGagaacccgtgtgtgtgtgttgcgcagGCTGCggattgtgtgtgagtgagggcgAGGATGAGGAGGGTGATGATGCTAGCAGGATGATGAAGAAGCAGTGTCGTGGTGGATGACAAcaagctgagagagacagaccagatggGGGCGGACGCCAGTAAAGCCAGCAAGAGACCCCCAGCAGGGtcaggggaaagagaagagactCAATGTTCTACAGGATGGAGAGGATTATTTTCCTCCGTTGGTCTGTCCATCCCTGCAAGCCTCTGTCGCCTGGCCCCTCCCACCCTGCGGCTCGGCCATCGGAGGATGATCAGAGATAAGGCCCCGCCTATCCCGGACCAGGTGTTAGGGGGAGGAGGGCCAGATAGACTGAGAGCAGAGTGGAGTCTGCCTGGCTTTATATCCATGTTCCTCCCTGAGTTCCCTCACAGAGCTGTACCAGGACATCAACACTTCCAGGTGTTGGGATATATCGCCAAAGGATCCTTTGGTCCCATTCTGAAGGTGAAGGACAAGGCCAAGCAGAAAACCTACGCTGTCAAGgtAATCCCTAAGTCAGAGATCCTGAGGCTGGGCGTTCTGGAACAGTCTAAAGAAGAAGTTATagtacagCGTCAGGTGCGTCACCCGTTCGTCCACGACCTTCAGGACTGctggcagacacagagacacctcTACATTAtGTGTGACTACTGCAGTACCGGGGACTTGTATACATACTGGGTGATGATTGGCCAGTTCAGCGAGGACGCTGTCAGGGTGTTTGCTGCAGAGTTAGGCTGCGCTCtcgGGTTCCTCCATGACGTTGGGATCATCCACAGAGATGTGAAGatggagaacattctgctCACAGATCAAGGCCACCTCCGTCTGGCTGACTTTGGTTTGTCTCGTcgtctggagagaggaggaagagcctTCACTATCTGTGGGACCATCCAGTACAtggcCCCTGAAGTTCTGAGTGGGGGACCCTACAGCCACTCAGCTGATTGGTGGTCGCTGGGAATCCTCCTCTTCTCATTGGTCACTGGGAAGTTCCCAGTCCTGCCTGAACCAGACCACTACAGTATGTTGAGGAGAGTGAGGTGTTTCCCCTACGACATCCCCCTCAGCTTCAGCCCTCCACTGGCTCTACTTATCACtgagctGCTGTGTAAGACACCGACGCGGCGGCTGCGGACCCTGGATCGTTTCAAACGGCAGACCTTTTTCCACGGTGCGACCTTTGACCTGGCGTTACTACAGCGACGACCTGTGGAGGTCATCTTGGCACTGCGGGAGCGTCCTGACCGGCCGGCCAAGGCCCGAAGAGGATTGACCCTGTCTCTGCAGCCGTTAAGAGGCTTCGACTACGATACCCTGCTCAGCCCTGCAGGGACGCCTGACACACACCTGGACGAccccgatacacacacacacctggacgaccccgatacacacacacacctggacgactccgatacacacacacacctggacgaccccgatacacacacacacttacacacaccgcTACCTGGCCCGGGCTGCCAGAATCAccttggacacacacactcttccatgCCCAgctccacacacactcacaggcctCCGACACATGGGAAGAAGGAGATGTTTGTGTGAAAAGGACCTACAGACACTCAGAGAATGGAgaaaggtcacacacacaccgtagccAGCTGGGAGCATGACGTTCTAGGACTATGACATTCCatgatgtcacaggaagtcccCTGCCCtttagcccctccccctcctgtaGAATATTTGAGTAATAAAGATATGTTCAGATTTGTAAACTGAAATCGAAAaattacacaaaaaaacaacataatatatatatacatatatgtatatatgtatataaacacacacacacacacaaatctggtcattccagggtttttct

Function

NR:

description
PREDICTED: 3-phosphoinositide-dependent protein kinase 1-like

GO: NA

KEGG:

id description
K17529 SGK494; uncharacterized serine/threonine-protein kinase SgK494

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036967807.1 True 2076 mRNA 0.53 12 47025620 47060435

Neighbor

gene id symbol gene type direction distance location
LOC118945349 NA coding downstream 6933 47016181 ~ 47021968 (-)
aldocb aldoc coding downstream 10283 46984254 ~ 47015337 (-)
pigs LOC106592729 coding downstream 53294 46957945 ~ 46972326 (-)
LOC110510303 LOC106563938 coding downstream 77203 46939593 ~ 46948417 (-)
ddx52 ddx52 coding downstream 90660 46890969 ~ 46934960 (-)
LOC110510308 LOC107669375 coding upstream 10307 47070742 ~ 47077583 (-)
LOC118945689 NA coding upstream 10468 47070903 ~ 47070967 (-)
LOC118945304 NA coding upstream 11250 47071685 ~ 47075462 (-)
ddias NA coding upstream 31338 47091773 ~ 47100242 (-)
birc2 LOC106563947 coding upstream 127114 47187549 ~ 47224194 (-)
G2189462 NA non-coding downstream 14527 47010627 ~ 47011093 (-)
G2189461 NA non-coding downstream 15127 47008490 ~ 47010493 (-)
G2189457 NA non-coding downstream 25604 46999660 ~ 47000016 (-)
G2189454 NA non-coding downstream 28933 46996299 ~ 46996687 (-)
G2189488 NA non-coding upstream 9710 47070145 ~ 47070437 (-)
G2189490 NA non-coding upstream 19633 47080068 ~ 47080388 (-)
G2189492 NA non-coding upstream 22309 47082744 ~ 47083570 (-)
G2189760 NA non-coding upstream 51991 47112426 ~ 47114713 (-)
G2189777 NA non-coding upstream 78854 47139289 ~ 47139712 (-)
G2189204 NA other downstream 255659 46769683 ~ 46769961 (-)
G2189115 NA other downstream 389452 46634238 ~ 46636168 (-)
G2188868 chordc1 other downstream 867814 46143319 ~ 46157806 (-)
G2188877 NA other downstream 940836 46081386 ~ 46084784 (-)
G2188420 NA other downstream 1221433 45802955 ~ 45804187 (-)
G2189814 NA other upstream 182614 47243049 ~ 47270482 (-)
G2189794 NA other upstream 225549 47285984 ~ 47287003 (-)
G2189898 NA other upstream 359499 47419934 ~ 47428596 (-)
G2189978 NA other upstream 542716 47603151 ~ 47604511 (-)

Expression


Co-expression Network