c1qc (LOC106591842)


Basic Information

Item Value
gene id c1qc
gene name LOC106591842
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048593.1
NCBI id CM023247.2
chromosome length 47748341
location 47280097 ~ 47287013 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036967927.1
ctctctctctctctctctctctctctctctctctctctgtgactctgtctctcgctctctctctgtctgtctcctcagaCTACAATCACACAGCATACAGTATTGTACAGTATTGTGCATCTTCTCTACTGCAGgTCTCTATTCAGTGGTTGCTATGGTCTGTTTTTGCATTGCTATGGGAGCTATGCTCTCATTGGCTCTGCCTGACCTGGTTACCATGGAGACGTGTACATCGGCGGGGACGCCTGGACTGCATGGTTTCCCAGGGTTACCAGGAAGGGACGGACGAGATGGAGAGACGGGGGAGAAGGGAGTGCCAgGTGTTGTATCTGGACCAGGCCAGATACCAGAGGGGGGCCAGAAGGGGGAGCCGGGTGTGAAGGGAGCGGTTGGGAAGCTAGGTCGTAGTGGTGTGAGAGGAGATAAGGGATCCCCAGGGTCAGAGGGACCCCGGGGAGAGCCAGGGGAGTCGGGCTCAGCAGGGTCTCTGTTCCATTCTGCCTTCAGCGTGGCCAGAGGTACCGCCAGCCCTCCAGAGAAGGCCAGCCCCATCAGATTTACCTCTGTTATCACTGATGTTAACAAGGACTACAACACAGAGACTGGACGCTTCAGgTGCCGCGTGCCGGGGACGTACTACTTTGTGTACCACGCGTCGTCTGAGGAGAGACTGTGTCTGGTGTTCAAACTGGATGGAACCAGTCTGGCCTCCTTCTGTGACCTGACGTACGGGGGCACGaagagacagGTGAGTTCGGGGGGTCTGGCTACGTACTTGAAGAAGGATCAGGAGGTGTGGTTAGAGACCAACGATTACAACGGCATGACGGGAAAACCTGAAGGGAACAGTCTCTTCTCTGGCTTCCTGCTCCACTCTCACTAACCTGAAGGGAACAGTCTCTTCTCTGGCTTCCTGCTCTACTCTCACTAACCTGAAGGGAACAGTCTCTTCTCTGGCTTCCTGCTCTACCCTCACTAACCTGAAGGGAACAGTCTCTTCTCTGGCTTCCTGTCTACACTCACAAACCTGAAGGGAACAGTCTCTTCTCTGGCTTCCTGCTCTACCCTCACTAACCTGAAGGGAACAGTCACTCCTCTGGCTTCCTGTGATTACCCTCACTAACCTGAAGGGAACAGTCTCTTCTCTGGCTTCCTGCTCTACCCTCACTAACCTGAAGGGAACAGTCTCTTCTCTGGCTTCCTGCTCTACCCTCACTAACCTGAAGGGAACAGTCACTCCTCTGGCTTCCTGCGATTACCCTCACTAACCTGAAGGGAACAGTCTCTTCTCTGGCTTCCTGCTCTACCCTCACTAACCTGAAGGGAACAGTCTCTTCTCTGGCTTCCTGCTCTACCCGCACTAACCTGAAGGGAACAGTCACTCCTCTGGCTTCCTGCTCTACCCTCACTAACCTGAAGGGAACAGTCTCTCCTCTGGCTTCCTGCGATTACCCTCACTAACCTGAAGGGAACAGTCTCTTCTCTGGCTTCCTGCTCTCCTCTCACTAACCTGAAGGGAACAGTCTCTTCTCTGGCTTCCTGCTCTACCctcactatatatatatctctctctatccctccatccatccatccaatcaatcaatcaatcaattaatgaATTACTTAATAATGTACTTCTATTATTCTGTTTTGAACAATAAAGGCGTTTTAACTCATGA
>XM_036967928.1
tctctctctctctctctctctgtgactctgtctctcgctctctctctgtctgtctcctcagaCTACAATCACACAGCATACAGTATTGTACAGTATTGTGCATCTTCTCTACTGCAGTGGTTGCTATGGTCTGTTTTTGCATTGCTATGGGAGCTATGCTCTCATTGGCTCTGCCTGACCTGGTTACCATGGAGACGTGTACATCGGCGGGGACGCCTGGACTGCATGGTTTCCCAGGGTTACCAGGAAGGGACGGACGAGATGGAGAGACGGGGGAGAAGGGAGTGCCAgGTGTTGTATCTGGACCAGGCCAGATACCAGAGGGGGGCCAGAAGGGGGAGCCGGGTGTGAAGGGAGCGGTTGGGAAGCTAGGTCGTAGTGGTGTGAGAGGAGATAAGGGATCCCCAGGGTCAGAGGGACCCCGGGGAGAGCCAGGGGAGTCGGGCTCAGCAGGGTCTCTGTTCCATTCTGCCTTCAGCGTGGCCAGAGGTACCGCCAGCCCTCCAGAGAAGGCCAGCCCCATCAGATTTACCTCTGTTATCACTGATGTTAACAAGGACTACAACACAGAGACTGGACGCTTCAGgTGCCGCGTGCCGGGGACGTACTACTTTGTGTACCACGCGTCGTCTGAGGAGAGACTGTGTCTGGTGTTCAAACTGGATGGAACCAGTCTGGCCTCCTTCTGTGACCTGACGTACGGGGGCACGaagagacagGTGAGTTCGGGGGGTCTGGCTACGTACTTGAAGAAGGATCAGGAGGTGTGGTTAGAGACCAACGATTACAACGGCATGACGGGAAAACCTGAAGGGAACAGTCTCTTCTCTGGCTTCCTGCTCCACTCTCACTAACCTGAAGGGAACAGTCTCTTCTCTGGCTTCCTGCTCTACTCTCACTAACCTGAAGGGAACAGTCTCTTCTCTGGCTTCCTGCTCTACCCTCACTAACCTGAAGGGAACAGTCTCTTCTCTGGCTTCCTGTCTACACTCACAAACCTGAAGGGAACAGTCTCTTCTCTGGCTTCCTGCTCTACCCTCACTAACCTGAAGGGAACAGTCACTCCTCTGGCTTCCTGTGATTACCCTCACTAACCTGAAGGGAACAGTCTCTTCTCTGGCTTCCTGCTCTACCCTCACTAACCTGAAGGGAACAGTCTCTTCTCTGGCTTCCTGCTCTACCCTCACTAACCTGAAGGGAACAGTCACTCCTCTGGCTTCCTGCGATTACCCTCACTAACCTGAAGGGAACAGTCTCTTCTCTGGCTTCCTGCTCTACCCTCACTAACCTGAAGGGAACAGTCTCTTCTCTGGCTTCCTGCTCTACCCGCACTAACCTGAAGGGAACAGTCACTCCTCTGGCTTCCTGCTCTACCCTCACTAACCTGAAGGGAACAGTCTCTCCTCTGGCTTCCTGCGATTACCCTCACTAACCTGAAGGGAACAGTCTCTTCTCTGGCTTCCTGCTCTCCTCTCACTAACCTGAAGGGAACAGTCTCTTCTCTGGCTTCCTGCTCTACCctcactatatatatatctctctctatccctccatccatccatccaatcaatcaatcaatcaattaatgaATTACTTAATAATGTACTTCTATTATTCTGTTTTGAACAATAAAGGCGTTTTAACTCATGA

Function

NR:

description
complement C1q subcomponent subunit C-like, partial

GO: NA

KEGG:

id description
K03988 C1QG; complement C1q subcomponent subunit C

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036967927.1 False 1679 mRNA 0.52 5 47280097 47287013
XM_036967928.1 True 1650 mRNA 0.52 5 47280114 47287013
Loading

Neighbor

gene id symbol gene type direction distance location
c1qa c1qc coding upstream 9594 47243005 ~ 47270503 (+)
polq LOC106595115 coding upstream 93476 47105413 ~ 47186621 (+)
LOC110510302 LOC106563936 coding upstream 391563 46863262 ~ 46888534 (+)
inpp5kb LOC106563939 coding upstream 644377 46588208 ~ 46636264 (+)
LOC118945337 LOC108237022 coding upstream 716098 46504069 ~ 46563999 (+)
c1qb c1qb coding downstream 17025 47304038 ~ 47314715 (+)
hoatz LOC100286538 coding downstream 56546 47343559 ~ 47359357 (+)
layna LOC106563960 coding downstream 80081 47367094 ~ 47385736 (+)
hspb2 hspb2 coding downstream 129915 47416928 ~ 47422187 (+)
LOC118945344 NA coding downstream 137047 47424060 ~ 47428623 (+)
G2189556 NA non-coding upstream 23113 47252265 ~ 47256984 (+)
G2189555 NA non-coding upstream 28935 47246885 ~ 47251162 (+)
G2189551 NA non-coding upstream 48887 47230435 ~ 47231210 (+)
G2189544 NA non-coding upstream 80346 47196919 ~ 47199751 (+)
G2189542 NA non-coding upstream 89492 47188273 ~ 47190605 (+)
G2189567 NA non-coding downstream 1121 47288134 ~ 47289046 (+)
G2189613 NA non-coding downstream 72648 47359661 ~ 47360112 (+)
G2189620 NA non-coding downstream 86806 47373819 ~ 47374086 (+)
G2189621 NA non-coding downstream 88138 47375151 ~ 47375456 (+)
G2189507 LOC106563947 other upstream 55744 47187555 ~ 47224353 (+)
G2189534 NA other upstream 114571 47165061 ~ 47165526 (+)
G2189323 LOC107735056 other upstream 202624 47070742 ~ 47077473 (+)
G2189283 NA other upstream 337338 46895556 ~ 46942759 (+)
G2189691 NA other downstream 278236 47565249 ~ 47567756 (+)
G2189694 NA other downstream 340289 47627302 ~ 47639517 (+)

Expression

c1qc(LOC106591842) Expression in all Baseline Samples

Bar chart with 20 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 750.
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c1qc(LOC106591842) Expression in each Bioproject

Bar chart with 21 bars.
c1qc(LOC106591842) Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 2000.
End of interactive chart.

Co-expression Network