hspb2 (hspb2)


Basic Information

Item Value
gene id hspb2
gene name hspb2
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048593.1
NCBI id CM023247.2
chromosome length 47748341
location 47416928 ~ 47422187 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036968194.1
TACCCTCACTCTCTATCCCCttactcactccctcactccctccctccatctgcctcactctctctttctccttctgtcaGTCATTGAGTCATGATGGCGGAGCGGACAGTGCCTCATGCATATCCCATGAGTACTCAGTGTGAACTGAACTCTCCCAGAAGGATCTACGACCAGAACTTTGGAGAGGCTCTTACCCCCCAGGACCTCCTCACCCCCACCCTGTACCATGGTTACTATGTCCGTCCAAGAATCACCAAGCAGCTAGGGCGGGGCTTCTCTGATATAGAGGCGGAGCCAGGGAAGTGGACCGTTCGATTGGACGTGTGTCAGTTCACTCCTGATGAAGTCACTGTTCGCACTGTCGACAACCTACTGGAGgtcagtggtAACCACTCCCAGAGACAAGATGTCCACGGGTTCATCAGTCGGTCGTTTACGAGGACCTACATACTTCCTGTGGGTGTCGACCCTCTACTGCTCTTCGTCGACCTATCACACGACGgcatcctctctgtctccgcTCCCCGGACAACCCCCGACCCGCCCTCTTCACACACgcatatcatacacacacacaccgacaagACAACCTAGTgacgacacacagacacaaccaaaATACGACCTAGTGTCCTCTGTCATGGATCAACCCCAATTCCCCCtaggatcaaccccaacaccctctaggatcaaccccaacaccctctAGGATCAACCCAACACCCTCTAGGATCAACCCCAATTCCCCTTAGGATCAACCTCAATTCTCCTtaggatcaaccccaacaccctctaggatcaaccccaacaccctctaggatcaaccccaacaccctctAGGATCAACCCAACACCCTCTAGGATCAACCCCAATACCCTCTAGGATCAACCCAACACCCTCTAGGATCAACCCCAATACCCTCTAGTGTCCTCTGTCATGGATCAACCCCAATACCCTCTAGGATCAACCCCAATTGCCCCtaggatcaaccccaacaccctctAGGATCAACCCCAATACCCCCTAGTGTCCTCTGTCATGGATCAACCCCAATACCCTCTAGTGTCCTCTGTCATGGATCAACCCCAATACGCCCTAGTGTCCTCTGTCATGGATCAACCCCAATACCCCCTAGTGTCCTCTGTCATGGATCAACCCCAATACCCCCTAGTGTCCTCTGTCATGGATCAACCCCAATACCCTCTAGGATCAAACCCAATACGCCCTAGTGTCCTCTGTCATGGATCAACCCCAATATCCCCTAGTGTCCTCTGTCATggatcaaccccaacaccctctAGGATCAACCCCAATACCTCCTAGTGTCCTCTGTCATggatcaaccccaacaccctctAGGATCAACCCCAATACCCCCCAGTGTCCTCTGTCATGGATCAACCCCAATTCCCCCtaggatcaaccccaacaccctctaggatcaaccccaacaccctctaggatcaaccccaacaccctctaggatcaaccccaacaccctctaggatcaaccccaacaccctctAGGATCAACCCCAATACCCTCTAGGATCAACCCAACACCCTCTAGGATCAACCCCAATACCCTCTAGTGTCCTCTGTCATGGATCAACCCCAATACCCTCTAGGATCAACCCCAATTGCCCCtaggatcaaccccaacaccctctAGGATCAACCCCAATACCCCCTAGTGTCCTCTGTCATGGATCAACCCCAATACCCTCTAGTGTCCTCTGTCATGGATCAACCCCAATACGCCCTAGTGTCCTCTGTCATGGATCAACCCCAATACCCCCTAGTGTCCTCTGTCATGGATCAACCCCAATACCCCCTAGTGTCCTCTGTCATggatcaaccccaacaccctctAGGATCAACCCCAATACCCCCCAGTGTCTTCTGTCATGGATCAACCCCAATTCCCCCtaggatcaaccccaacaccctctaggatcaaccccaacaccctctAGGATCAACCCAACACCCTCTAGGATCAACCCCAATTCCCCTTAGGATTAACCTCAATTCTCCTtaggatcaaccccaacaccctctaggatcaaccccaacaccctctaggatcaaccccaacaccctctaggatcaaccccaacaccctctAGGATCAACCCAACACCCTCTAGGATCAACCCCAATACCCTCTAGGATCAACCCAACACCCTCTAGGATCAACCCCAATACCCTCTAGTGTCCTCTGTCATGGATCAACCCCAATTCCCCCtaggatcaaccccaacaccctctaggatcaaccccaacaccctctaggatcaaccccaacaccctctaggatcaaccccaacaccctctaggatcaaccccaacaccctctAGGATCAACCCCAATACCCTCTAGGATCAACCCAACACCCTCTAGGATCAACCCCAATACCCTCTAGTGTCCTCTGTCATGGATCAACCCCAATACCCTCTAGGATCAACCCCAATTGCCCCtaggatcaaccccaacaccctctAGGATCAACCCCAATACCCCCTAGTGTCCTCTGTCATGGATCAACCCCAATACCCTCTAGTGTCCTCTGTCATGGATCAACCCCAATACCCCCTAGTGTCCTCTGTCAT

Function

symbol description
hspb2 Orthologous to human HSPB2 (heat shock protein family B (small) member 2).

NR:

description
PREDICTED: heat shock protein beta-2

GO:

id name namespace
GO:0006950 response to stress biological_process

KEGG:

id description
K09543 HSPB2; heat shock protein beta-2

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036968194.1 True 2614 mRNA 0.53 3 47416928 47422187

Neighbor

gene id symbol gene type direction distance location
layna LOC106563960 coding upstream 31399 47367094 ~ 47385736 (+)
hoatz LOC100286538 coding upstream 57571 47343559 ~ 47359357 (+)
c1qb c1qb coding upstream 102213 47304038 ~ 47314715 (+)
c1qc LOC106591842 coding upstream 129915 47280097 ~ 47287013 (+)
c1qa c1qc coding upstream 146425 47243005 ~ 47270503 (+)
LOC118945344 NA coding downstream 1873 47424060 ~ 47428623 (+)
bicdl2 LOC106594403 coding downstream 25571 47447758 ~ 47475718 (+)
ufc1 ufc1 coding downstream 133889 47556076 ~ 47568995 (+)
LOC110510300 NA coding downstream 149575 47571762 ~ 47634969 (+)
LOC118945301 NA coding downstream 216500 47638687 ~ 47639146 (+)
G2189636 NA non-coding upstream 4224 47411367 ~ 47412704 (+)
G2189601 NA non-coding upstream 7351 47409029 ~ 47409577 (+)
G2189607 LOC106563953 non-coding upstream 19327 47395692 ~ 47397601 (+)
G2189621 NA non-coding upstream 41472 47375151 ~ 47375456 (+)
G2189640 NA non-coding downstream 11947 47434134 ~ 47434421 (+)
G2189641 NA non-coding downstream 12982 47435169 ~ 47435456 (+)
G2189642 NA non-coding downstream 21582 47443769 ~ 47444171 (+)
G2189644 NA non-coding downstream 23314 47445501 ~ 47445731 (+)
G2189645 NA non-coding downstream 24150 47446337 ~ 47446610 (+)
G2189507 LOC106563947 other upstream 192575 47187555 ~ 47224353 (+)
G2189534 NA other upstream 251402 47165061 ~ 47165526 (+)
polq LOC106595115 other upstream 265276 47105413 ~ 47186621 (+)
G2189323 LOC107735056 other upstream 339455 47070742 ~ 47077473 (+)
G2189283 NA other upstream 474169 46895556 ~ 46942759 (+)
G2189691 NA other downstream 143062 47565249 ~ 47567756 (+)
G2189694 NA other downstream 205115 47627302 ~ 47639517 (+)

Expression

hspb2(hspb2) Expression in all Baseline Samples

Bar chart with 20 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 60.
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hspb2(hspb2) Expression in each Bioproject

Bar chart with 19 bars.
hspb2(hspb2) Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 200.
End of interactive chart.

Co-expression Network