G2139328


Basic Information

Item Value
gene id G2139328
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048593.1
NCBI id CM023247.2
chromosome length 47748341
location 458877 ~ 531187 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2446889
gtgatagactgcatccaatttgttgagtagggtattggaggctattttgtaaattacatcgccaaagtcgaggattggtaggatggtcatttttacaagggtatgtttggcagcatgagtgaaggatgctttcttgcgaaataggaagccaattctagatttaactttggattggagatgtttgatgtgggtctggaaggagagtttacagtctaaccagacacctaggtatttgtagttgtccacgtattctaagtcagagccgtccagagtagtgatgttggacaggcgggcaggtgcaggcagcgatcggttgaagagcatgcatttagttttacttgtatttaag

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2446889 True 349 lncRNA 0.43 2 458877 531187

Neighbor

gene id symbol gene type direction distance location
LOC110509491 LOC106562835 coding upstream 13895 438137 ~ 444982 (+)
LOC110509488 set coding upstream 167851 287196 ~ 291026 (+)
LOC110509486 LOC106562830 coding upstream 309619 131779 ~ 149258 (+)
LOC110509485 LOC106562829 coding upstream 352078 71933 ~ 106799 (+)
LOC110509291 LOC106562839 coding downstream 5071 536258 ~ 614583 (+)
LOC100305272 dpm2 coding downstream 88602 619789 ~ 629216 (+)
LOC110509496 LOC106562840 coding downstream 100834 632021 ~ 650126 (+)
LOC110509498 LOC106562841 coding downstream 160554 691741 ~ 694348 (+)
LOC110509499 LOC106562841 coding downstream 163340 694527 ~ 703826 (+)
G2139281 pol3 non-coding upstream 79944 378711 ~ 378933 (+)
G2139267 NA non-coding upstream 98555 352002 ~ 360322 (+)
G2139198 LOC106562832 non-coding upstream 125963 315974 ~ 332914 (+)
G2139197 LOC106562832 non-coding upstream 135043 313808 ~ 323834 (+)
G2139206 NA non-coding upstream 213514 235734 ~ 245363 (+)
G2139362 NA non-coding downstream 71057 602244 ~ 602933 (+)
G2139436 NA non-coding downstream 187116 718303 ~ 718546 (+)
G2139437 NA non-coding downstream 189424 720611 ~ 720927 (+)
G2139438 NA non-coding downstream 191896 723083 ~ 723874 (+)
G2139202 NA other upstream 133829 324366 ~ 325048 (+)
G2139145 NA other upstream 300044 158015 ~ 158833 (+)
G2139520 LOC106562868 other downstream 321062 852249 ~ 853787 (+)
LOC110509506 LOC106562870 other downstream 875027 1271496 ~ 1429741 (+)
LOC110509295 LOC106562719 other downstream 1041360 1572502 ~ 1618684 (+)
LOC110509554 LOC105007341 other downstream 1407197 1935597 ~ 1941376 (+)

Expression


Co-expression Network