Gene
RNA
| Item | Value |
|---|---|
| gene id | G2139436 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048593.1 |
| NCBI id | CM023247.2 |
| chromosome length | 47748341 |
| location | 718303 ~ 718546 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2447019 | True | 244 | lncRNA | 0.36 | 1 | 718303 | 718546 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110509499 | LOC106562841 | coding | upstream | 14477 | 694527 ~ 703826 (+) |
| LOC110509498 | LOC106562841 | coding | upstream | 23955 | 691741 ~ 694348 (+) |
| LOC110509496 | LOC106562840 | coding | upstream | 68177 | 632021 ~ 650126 (+) |
| LOC100305272 | dpm2 | coding | upstream | 89306 | 619789 ~ 629216 (+) |
| LOC110509291 | LOC106562839 | coding | upstream | 103720 | 536258 ~ 614583 (+) |
| LOC110509503 | LOC106562869 | coding | downstream | 117282 | 835828 ~ 844013 (+) |
| LOC110509506 | LOC106562870 | coding | downstream | 552950 | 1271496 ~ 1429741 (+) |
| LOC110509509 | LOC106562874 | coding | downstream | 800870 | 1519416 ~ 1532574 (+) |
| LOC110509512 | LOC106562877 | coding | downstream | 836079 | 1554625 ~ 1558840 (+) |
| LOC110509295 | LOC106562719 | coding | downstream | 853956 | 1572502 ~ 1618684 (+) |
| G2139362 | NA | non-coding | upstream | 115370 | 602244 ~ 602933 (+) |
| G2139328 | NA | non-coding | upstream | 187116 | 458877 ~ 531187 (+) |
| G2139281 | pol3 | non-coding | upstream | 339370 | 378711 ~ 378933 (+) |
| G2139267 | NA | non-coding | upstream | 357981 | 352002 ~ 360322 (+) |
| G2139437 | NA | non-coding | downstream | 2065 | 720611 ~ 720927 (+) |
| G2139438 | NA | non-coding | downstream | 4537 | 723083 ~ 723874 (+) |
| G2139439 | NA | non-coding | downstream | 5492 | 724038 ~ 724393 (+) |
| G2139512 | NA | non-coding | downstream | 108241 | 826787 ~ 827022 (+) |
| G2139515 | NA | non-coding | downstream | 115276 | 833822 ~ 834167 (+) |
| G2139202 | NA | other | upstream | 393255 | 324366 ~ 325048 (+) |
| G2139145 | NA | other | upstream | 559470 | 158015 ~ 158833 (+) |
| LOC110509486 | LOC106562830 | other | upstream | 569050 | 131779 ~ 149258 (+) |
| G2139520 | LOC106562868 | other | downstream | 133703 | 852249 ~ 853787 (+) |
| LOC110509554 | LOC105007341 | other | downstream | 1219838 | 1935597 ~ 1941376 (+) |
| G2142277 | NA | other | downstream | 2364671 | 3083217 ~ 3083571 (+) |
