Gene
RNA
| Item | Value |
|---|---|
| gene id | G2140207 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048593.1 |
| NCBI id | CM023247.2 |
| chromosome length | 47748341 |
| location | 1069455 ~ 1069900 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2447885 | True | 446 | lncRNA | 0.46 | 1 | 1069455 | 1069900 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110509503 | LOC106562869 | coding | upstream | 225442 | 835828 ~ 844013 (+) |
| LOC110509499 | LOC106562841 | coding | upstream | 365629 | 694527 ~ 703826 (+) |
| LOC110509498 | LOC106562841 | coding | upstream | 375107 | 691741 ~ 694348 (+) |
| LOC110509496 | LOC106562840 | coding | upstream | 419329 | 632021 ~ 650126 (+) |
| LOC100305272 | dpm2 | coding | upstream | 440458 | 619789 ~ 629216 (+) |
| LOC110509506 | LOC106562870 | coding | downstream | 201596 | 1271496 ~ 1429741 (+) |
| LOC110509509 | LOC106562874 | coding | downstream | 449516 | 1519416 ~ 1532574 (+) |
| LOC110509512 | LOC106562877 | coding | downstream | 484725 | 1554625 ~ 1558840 (+) |
| LOC110509295 | LOC106562719 | coding | downstream | 502602 | 1572502 ~ 1618684 (+) |
| LOC110509513 | LOC106562718 | coding | downstream | 584692 | 1654592 ~ 1662205 (+) |
| G2140190 | NA | non-coding | upstream | 11977 | 1004968 ~ 1057478 (+) |
| G2140191 | NA | non-coding | upstream | 35615 | 1015116 ~ 1033840 (+) |
| G2140185 | NA | non-coding | upstream | 72626 | 996602 ~ 996829 (+) |
| G2140166 | NA | non-coding | upstream | 96681 | 972516 ~ 972774 (+) |
| G2140165 | NA | non-coding | upstream | 97061 | 971572 ~ 972394 (+) |
| G2140208 | NA | non-coding | downstream | 1654 | 1071554 ~ 1071806 (+) |
| G2140212 | NA | non-coding | downstream | 5617 | 1075517 ~ 1076253 (+) |
| G2140214 | NA | non-coding | downstream | 13124 | 1083024 ~ 1083394 (+) |
| G2140215 | NA | non-coding | downstream | 14273 | 1084173 ~ 1084408 (+) |
| G2140226 | NA | non-coding | downstream | 34441 | 1104341 ~ 1105020 (+) |
| G2139520 | LOC106562868 | other | upstream | 215668 | 852249 ~ 853787 (+) |
| LOC110509291 | LOC106562839 | other | upstream | 478651 | 536258 ~ 614583 (+) |
| G2139202 | NA | other | upstream | 744407 | 324366 ~ 325048 (+) |
| G2139145 | NA | other | upstream | 910622 | 158015 ~ 158833 (+) |
| LOC110509486 | LOC106562830 | other | upstream | 920202 | 131779 ~ 149258 (+) |
| LOC110509554 | LOC105007341 | other | downstream | 868484 | 1935597 ~ 1941376 (+) |
| G2142277 | NA | other | downstream | 2013317 | 3083217 ~ 3083571 (+) |
| G2142386 | LOC106562824 | other | downstream | 2249049 | 3318949 ~ 3324094 (+) |
