G2140214


Basic Information

Item Value
gene id G2140214
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048593.1
NCBI id CM023247.2
chromosome length 47748341
location 1083024 ~ 1083394 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2447892
aaaacatcctgcattggccgggaatcgaacccgggcctcccgcgtggcaggcgagaattctaccactgaacaaccaatgccttggaatactgagataatgctggaaaatcgtatcataaagctttatctccaagcatatttttcgcatagtgggctcagctacattgttcagcctaaaaaaaaaaagcagtcctttctccccgtcggggaattgaaccccggtctcccgcgtgacaggcggggatactcaccactatactaacgaggagctggtgtggtggacgtttgaaaaaacgtggagcattggtactaactatacgtttgcagtgttgggctttaacacttctaacaaaaacatatgtatagactga

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2447892 True 371 lncRNA 0.47 1 1083024 1083394

Neighbor

gene id symbol gene type direction distance location
LOC110509503 LOC106562869 coding upstream 239011 835828 ~ 844013 (+)
LOC110509499 LOC106562841 coding upstream 379198 694527 ~ 703826 (+)
LOC110509498 LOC106562841 coding upstream 388676 691741 ~ 694348 (+)
LOC110509496 LOC106562840 coding upstream 432898 632021 ~ 650126 (+)
LOC100305272 dpm2 coding upstream 454027 619789 ~ 629216 (+)
LOC110509506 LOC106562870 coding downstream 188102 1271496 ~ 1429741 (+)
LOC110509509 LOC106562874 coding downstream 436022 1519416 ~ 1532574 (+)
LOC110509512 LOC106562877 coding downstream 471231 1554625 ~ 1558840 (+)
LOC110509295 LOC106562719 coding downstream 489108 1572502 ~ 1618684 (+)
LOC110509513 LOC106562718 coding downstream 571198 1654592 ~ 1662205 (+)
G2140212 NA non-coding upstream 6771 1075517 ~ 1076253 (+)
G2140208 NA non-coding upstream 11218 1071554 ~ 1071806 (+)
G2140207 NA non-coding upstream 13124 1069455 ~ 1069900 (+)
G2140190 NA non-coding upstream 25546 1004968 ~ 1057478 (+)
G2140191 NA non-coding upstream 49184 1015116 ~ 1033840 (+)
G2140215 NA non-coding downstream 779 1084173 ~ 1084408 (+)
G2140226 NA non-coding downstream 20947 1104341 ~ 1105020 (+)
G2140229 NA non-coding downstream 27284 1110678 ~ 1111439 (+)
G2140234 NA non-coding downstream 29967 1113361 ~ 1113656 (+)
G2140235 NA non-coding downstream 30621 1114015 ~ 1115585 (+)
G2139520 LOC106562868 other upstream 229237 852249 ~ 853787 (+)
LOC110509291 LOC106562839 other upstream 492220 536258 ~ 614583 (+)
G2139202 NA other upstream 757976 324366 ~ 325048 (+)
G2139145 NA other upstream 924191 158015 ~ 158833 (+)
LOC110509486 LOC106562830 other upstream 933771 131779 ~ 149258 (+)
LOC110509554 LOC105007341 other downstream 854990 1935597 ~ 1941376 (+)
G2142277 NA other downstream 1999823 3083217 ~ 3083571 (+)
G2142386 LOC106562824 other downstream 2235555 3318949 ~ 3324094 (+)

Expression


Co-expression Network