G2140229


Basic Information

Item Value
gene id G2140229
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048593.1
NCBI id CM023247.2
chromosome length 47748341
location 1110678 ~ 1111439 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2447908
cctcccgcgtggcaggcgagaattctaccactgaacaaccaatgccttggaatactgagataatgctggaaatcgtatcataaagctttatctccaagcatatttttcgcatagtgggctcagctacattgttcaccctaaaaaaaaagcagtcctttctccccgtcggggaattgaaccccggtctcccgcgtgacaggcggggatactcaccactataccaacgaggagctggtgtggtggacgtttgaaaaaacgtggagcattggtactaactatacgtttgcagtgttgggctttaacacttctaacaaaaacatctgtatagactgaatggttagagctagaaactactgtaacccctctatggaaagctgggactctcacgaaaacgtacatgtaatcgatttcgctctataccactcacaggccacacactcgtagttagaaggtgatgcgtttgtgggatgtcccaggacattgtcacaaatgccaaactcaagacagttgtcgatgactagttggttactcgtttcccatttaacaacttaagccttgcacaaagtaaatcacctcacacactggacatctacaatggattcaccaaagtcttctgagaatgagtaaatgtccaaactgaaaatgaaagcaaagtcagatttttcaagagtcagttgagatttctgttggcctggcaatcgagcacagatttctcccacactcgtagttagaaggtgatgcgtttgtgggatgtcccaggat

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2447908 True 762 lncRNA 0.45 1 1110678 1111439

Neighbor

gene id symbol gene type direction distance location
LOC110509503 LOC106562869 coding upstream 266665 835828 ~ 844013 (+)
LOC110509499 LOC106562841 coding upstream 406852 694527 ~ 703826 (+)
LOC110509498 LOC106562841 coding upstream 416330 691741 ~ 694348 (+)
LOC110509496 LOC106562840 coding upstream 460552 632021 ~ 650126 (+)
LOC100305272 dpm2 coding upstream 481681 619789 ~ 629216 (+)
LOC110509506 LOC106562870 coding downstream 160057 1271496 ~ 1429741 (+)
LOC110509509 LOC106562874 coding downstream 407977 1519416 ~ 1532574 (+)
LOC110509512 LOC106562877 coding downstream 443186 1554625 ~ 1558840 (+)
LOC110509295 LOC106562719 coding downstream 461063 1572502 ~ 1618684 (+)
LOC110509513 LOC106562718 coding downstream 543153 1654592 ~ 1662205 (+)
G2140226 NA non-coding upstream 5658 1104341 ~ 1105020 (+)
G2140215 NA non-coding upstream 26270 1084173 ~ 1084408 (+)
G2140214 NA non-coding upstream 27284 1083024 ~ 1083394 (+)
G2140212 NA non-coding upstream 34425 1075517 ~ 1076253 (+)
G2140208 NA non-coding upstream 38872 1071554 ~ 1071806 (+)
G2140234 NA non-coding downstream 1922 1113361 ~ 1113656 (+)
G2140235 NA non-coding downstream 2576 1114015 ~ 1115585 (+)
G2140237 NA non-coding downstream 4681 1116120 ~ 1116439 (+)
G2140263 NA non-coding downstream 33123 1144562 ~ 1211869 (+)
G2140369 NA non-coding downstream 109990 1221429 ~ 1221828 (+)
G2139520 LOC106562868 other upstream 256891 852249 ~ 853787 (+)
LOC110509291 LOC106562839 other upstream 519874 536258 ~ 614583 (+)
G2139202 NA other upstream 785630 324366 ~ 325048 (+)
G2139145 NA other upstream 951845 158015 ~ 158833 (+)
LOC110509486 LOC106562830 other upstream 961425 131779 ~ 149258 (+)
LOC110509554 LOC105007341 other downstream 826945 1935597 ~ 1941376 (+)
G2142277 NA other downstream 1971778 3083217 ~ 3083571 (+)
G2142386 LOC106562824 other downstream 2207510 3318949 ~ 3324094 (+)

Expression


Co-expression Network