G2140263


Basic Information

Item Value
gene id G2140263
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048593.1
NCBI id CM023247.2
chromosome length 47748341
location 1144562 ~ 1211869 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2447945
ttgagctaacgtgcatcctgtttccattgctcatccttgagatgtttctacaacttgaatttaccaacacctgtggtaaattcaattgattaaacatgatttggaaaggcatacccctgtctatataaggccctacagttgacagtgcatgtcagagcaaaaaccaagccatgaggtcgagggacttgtccgtagagctccgagataggattgtgtcaaggcacagatctggggaagggtaccaaaaaatatctgcagcattgaagttccccaagaataCAGTCGCCTCGATCATTCttatatggaagaagtttgaaaccaccaagactctttctacaactggctgcccggccaaactgagcaatcaggggagaagggccttccttggtcagtgaggtgaccaagaacccgatgatcactctgacagaggtcaCGAGTTCCTCTgtcgagatgggagaactttccagaaggacaaccatctctgcagcactccaccaagcagGCCATTATGGTAAagtgtccagacggaagccactcctcagtaaaaggcacatgacagccgcttggagtttgccaaaaggcacctaaaggaatgtcacaccatgagaaacaagcctgaatgccaagcatcacgcctggagga

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2447945 True 643 lncRNA 0.48 2 1144562 1211869

Neighbor

gene id symbol gene type direction distance location
LOC110509503 LOC106562869 coding upstream 300549 835828 ~ 844013 (+)
LOC110509499 LOC106562841 coding upstream 440736 694527 ~ 703826 (+)
LOC110509498 LOC106562841 coding upstream 450214 691741 ~ 694348 (+)
LOC110509496 LOC106562840 coding upstream 494436 632021 ~ 650126 (+)
LOC100305272 dpm2 coding upstream 515565 619789 ~ 629216 (+)
LOC110509506 LOC106562870 coding downstream 59627 1271496 ~ 1429741 (+)
LOC110509509 LOC106562874 coding downstream 307547 1519416 ~ 1532574 (+)
LOC110509512 LOC106562877 coding downstream 342756 1554625 ~ 1558840 (+)
LOC110509295 LOC106562719 coding downstream 360633 1572502 ~ 1618684 (+)
LOC110509513 LOC106562718 coding downstream 442723 1654592 ~ 1662205 (+)
G2140237 NA non-coding upstream 28123 1116120 ~ 1116439 (+)
G2140235 NA non-coding upstream 28977 1114015 ~ 1115585 (+)
G2140234 NA non-coding upstream 30906 1113361 ~ 1113656 (+)
G2140229 NA non-coding upstream 33123 1110678 ~ 1111439 (+)
G2140226 NA non-coding upstream 39542 1104341 ~ 1105020 (+)
G2140369 NA non-coding downstream 9560 1221429 ~ 1221828 (+)
G2140511 NA non-coding downstream 246330 1458199 ~ 1458409 (+)
G2140520 NA non-coding downstream 267049 1478918 ~ 1479139 (+)
G2140523 NA non-coding downstream 269318 1481187 ~ 1481435 (+)
G2140524 NA non-coding downstream 270651 1482520 ~ 1482731 (+)
G2139520 LOC106562868 other upstream 290775 852249 ~ 853787 (+)
LOC110509291 LOC106562839 other upstream 553758 536258 ~ 614583 (+)
G2139202 NA other upstream 819514 324366 ~ 325048 (+)
G2139145 NA other upstream 985729 158015 ~ 158833 (+)
LOC110509486 LOC106562830 other upstream 995309 131779 ~ 149258 (+)
LOC110509554 LOC105007341 other downstream 726515 1935597 ~ 1941376 (+)
G2142277 NA other downstream 1871348 3083217 ~ 3083571 (+)
G2142386 LOC106562824 other downstream 2107080 3318949 ~ 3324094 (+)

Expression


Co-expression Network