Gene
RNA
| Item | Value |
|---|---|
| gene id | G2140572 |
| gene name | LOC100194725 |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048593.1 |
| NCBI id | CM023247.2 |
| chromosome length | 47748341 |
| location | 1551059 ~ 1554617 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2448273 | False | 1540 | lncRNA | 0.49 | 7 | 1551059 | 1554617 |
| TU2448276 | False | 854 | lncRNA | 0.55 | 8 | 1551059 | 1554617 |
| TU2448277 | True | 1137 | lncRNA | 0.51 | 7 | 1551059 | 1554617 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110509509 | LOC106562874 | coding | upstream | 18485 | 1519416 ~ 1532574 (+) |
| LOC110509506 | LOC106562870 | coding | upstream | 121318 | 1271496 ~ 1429741 (+) |
| LOC110509503 | LOC106562869 | coding | upstream | 707046 | 835828 ~ 844013 (+) |
| LOC110509499 | LOC106562841 | coding | upstream | 847233 | 694527 ~ 703826 (+) |
| LOC110509498 | LOC106562841 | coding | upstream | 856711 | 691741 ~ 694348 (+) |
| LOC110509512 | LOC106562877 | coding | downstream | 8 | 1554625 ~ 1558840 (+) |
| LOC110509295 | LOC106562719 | coding | downstream | 17885 | 1572502 ~ 1618684 (+) |
| LOC110509513 | LOC106562718 | coding | downstream | 99975 | 1654592 ~ 1662205 (+) |
| LOC110509514 | LOC106562918 | coding | downstream | 166374 | 1720991 ~ 1760307 (+) |
| LOC110509515 | LOC106563008 | coding | downstream | 206646 | 1761263 ~ 1775741 (+) |
| G2140569 | NA | non-coding | upstream | 2959 | 1547786 ~ 1548100 (+) |
| G2140564 | NA | non-coding | upstream | 7933 | 1542895 ~ 1543126 (+) |
| G2140563 | NA | non-coding | upstream | 8630 | 1542141 ~ 1542429 (+) |
| G2140558 | NA | non-coding | upstream | 15722 | 1534992 ~ 1535337 (+) |
| G2140533 | NA | non-coding | upstream | 59798 | 1491037 ~ 1491261 (+) |
| G2140468 | NA | non-coding | downstream | 5520 | 1560137 ~ 1560425 (+) |
| G2140575 | NA | non-coding | downstream | 14083 | 1568700 ~ 1568907 (+) |
| G2140577 | NA | non-coding | downstream | 15846 | 1570463 ~ 1570761 (+) |
| G2140593 | NA | non-coding | downstream | 57697 | 1612314 ~ 1613874 (+) |
| G2140580 | NA | non-coding | downstream | 66386 | 1621003 ~ 1635825 (+) |
| G2139520 | LOC106562868 | other | upstream | 697272 | 852249 ~ 853787 (+) |
| LOC110509291 | LOC106562839 | other | upstream | 960255 | 536258 ~ 614583 (+) |
| G2139202 | NA | other | upstream | 1226011 | 324366 ~ 325048 (+) |
| G2139145 | NA | other | upstream | 1392226 | 158015 ~ 158833 (+) |
| LOC110509554 | LOC105007341 | other | downstream | 383767 | 1935597 ~ 1941376 (+) |
| G2142277 | NA | other | downstream | 1528600 | 3083217 ~ 3083571 (+) |
| G2142386 | LOC106562824 | other | downstream | 1764332 | 3318949 ~ 3324094 (+) |
| G2144385 | NA | other | downstream | 3473134 | 5027751 ~ 5028239 (+) |
