G2141285


Basic Information

Item Value
gene id G2141285
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048593.1
NCBI id CM023247.2
chromosome length 47748341
location 1641545 ~ 1642228 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2449075
CTCCACATCATAACACTAACAATTGTACAATCCTCCCAATGCCAATGTCCAATGATGTCAGTGCTAATAGACTGGTGTTTACCAGAAATGTCAAACTTGTCAACAAAACGCTCTCCAATTTACTGTTCGCTTTTCATGGTGACAGTTTCTCCTGCCATGAAGGGCACTTAAATCCTTATATGCACTGTTCTTAGACTTCTAAAATGTATCCATAACCTTTACAACAACCTGACCTAGAAAAAATATTATTTGGTGTCAGTTTCTGTTGTAGCCTCATTTGCTCAGTTTTAACACAAGGCAGATGTGTCCATGTCAACTCCTGGATAATGTCCATGGTGCTACTGTTGGCAAGAAGGACTCTTTATCATCCTTTTATGAGAAATATTCCCGTGCATGAAAGGAGTTTGTCACATTTAAGTGGAATGcaattcagttgtacaactgactaggtattatATACAGGTAAACACCCATAGCATGTCAGTCCTCCTAACCATTTCTCTCCCCCGGGCATGTAATTTTCAGAAAGCTTGCGTTCGGATTGTTTGAAAAGATGCAGGTGGTGTGGAAACTTTGTAGGTGGGAGCGCCAAACTTCAAAGAGAGTTTCCCTTTCTTCTCTGCTGTTTGGCTCTGGATCTGTCTGTaccctggttaaaccagactgaatgctTTGCTCAAGTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2449075 True 684 lncRNA 0.41 1 1641545 1642228
Loading

Neighbor

gene id symbol gene type direction distance location
LOC110509510 LOC100194725 coding downstream 86904 1551060 ~ 1554641 (-)
LOC118945677 NA coding downstream 87583 1553886 ~ 1553962 (-)
LOC118945682 NA coding downstream 87929 1553548 ~ 1553616 (-)
LOC118945683 NA coding downstream 88339 1553138 ~ 1553206 (-)
LOC118945678 NA coding downstream 88724 1552754 ~ 1552821 (-)
LOC110509306 LOC106562912 coding upstream 293047 1935275 ~ 1935940 (-)
LOC110509556 LOC106562911 coding upstream 298958 1941186 ~ 1943193 (-)
LOC118945681 NA coding upstream 301758 1943986 ~ 1944040 (-)
mrps24 LOC106562909 coding upstream 400679 2042907 ~ 2044519 (-)
LOC110509353 LOC106562905 coding upstream 631285 2257334 ~ 2308157 (-)
G2141284 NA non-coding downstream 452 1640823 ~ 1641093 (-)
G2141283 NA non-coding downstream 1102 1640077 ~ 1640443 (-)
G2141276 NA non-coding downstream 21022 1620197 ~ 1620523 (-)
G2141223 NA non-coding downstream 80655 1560458 ~ 1560890 (-)
G2141222 NA non-coding downstream 81169 1560143 ~ 1560376 (-)
G2141286 NA non-coding upstream 1388 1643616 ~ 1644236 (-)
G2141291 NA non-coding upstream 9908 1652136 ~ 1652448 (-)
G2141320 NA non-coding upstream 60889 1703117 ~ 1703637 (-)
G2141411 NA non-coding upstream 209859 1852087 ~ 1855651 (-)
G2141413 NA non-coding upstream 213748 1855976 ~ 1856194 (-)
G2141258 NA other downstream 28336 1598021 ~ 1613209 (-)
LOC110509502 LOC106562868 other downstream 703636 843748 ~ 937986 (-)
LOC110509492 LOC106562836 other downstream 1213473 425727 ~ 437447 (-)
LOC110509490 LOC106562833 other downstream 1239990 398511 ~ 425356 (-)
G2139807 LOC106602244 other downstream 1263058 378211 ~ 378487 (-)
G2141289 LOC100380853 other upstream 7071 1649299 ~ 1649731 (-)
LOC110509525 LOC106562824 other upstream 1676715 3317596 ~ 3324117 (-)
G2143134 NA other upstream 1985937 3628165 ~ 3635240 (-)
LOC110509531 LOC106570883 other upstream 2679671 4208866 ~ 4430679 (-)
G2144911 NA other upstream 3572855 5215083 ~ 5226311 (-)

Expression

G2141285 Expression in all Baseline Samples

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The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 1.
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G2141285 Expression in each Bioproject

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G2141285 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 40.
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Co-expression Network