Gene
RNA
| Item | Value |
|---|---|
| gene id | G2141320 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048593.1 |
| NCBI id | CM023247.2 |
| chromosome length | 47748341 |
| location | 1703117 ~ 1703637 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: uncharacterized protein LOC106586305 isoform X3 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2449110 | True | 313 | lncRNA | 0.50 | 3 | 1703117 | 1703637 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110509510 | LOC100194725 | coding | downstream | 148476 | 1551060 ~ 1554641 (-) |
| LOC118945677 | NA | coding | downstream | 149155 | 1553886 ~ 1553962 (-) |
| LOC118945682 | NA | coding | downstream | 149501 | 1553548 ~ 1553616 (-) |
| LOC118945683 | NA | coding | downstream | 149911 | 1553138 ~ 1553206 (-) |
| LOC118945678 | NA | coding | downstream | 150296 | 1552754 ~ 1552821 (-) |
| LOC110509306 | LOC106562912 | coding | upstream | 231638 | 1935275 ~ 1935940 (-) |
| LOC110509556 | LOC106562911 | coding | upstream | 237549 | 1941186 ~ 1943193 (-) |
| LOC118945681 | NA | coding | upstream | 240349 | 1943986 ~ 1944040 (-) |
| mrps24 | LOC106562909 | coding | upstream | 339270 | 2042907 ~ 2044519 (-) |
| LOC110509353 | LOC106562905 | coding | upstream | 569876 | 2257334 ~ 2308157 (-) |
| G2141291 | NA | non-coding | downstream | 50669 | 1652136 ~ 1652448 (-) |
| G2141286 | NA | non-coding | downstream | 58881 | 1643616 ~ 1644236 (-) |
| G2141285 | NA | non-coding | downstream | 60889 | 1641545 ~ 1642228 (-) |
| G2141284 | NA | non-coding | downstream | 62024 | 1640823 ~ 1641093 (-) |
| G2141283 | NA | non-coding | downstream | 62674 | 1640077 ~ 1640443 (-) |
| G2141411 | NA | non-coding | upstream | 148450 | 1852087 ~ 1855651 (-) |
| G2141413 | NA | non-coding | upstream | 152339 | 1855976 ~ 1856194 (-) |
| G2141438 | NA | non-coding | upstream | 208971 | 1912608 ~ 1912838 (-) |
| G2141439 | NA | non-coding | upstream | 209513 | 1913150 ~ 1913422 (-) |
| G2141497 | NA | non-coding | upstream | 294920 | 1998557 ~ 2029446 (-) |
| G2141289 | LOC100380853 | other | downstream | 53386 | 1649299 ~ 1649731 (-) |
| G2141258 | NA | other | downstream | 89908 | 1598021 ~ 1613209 (-) |
| LOC110509502 | LOC106562868 | other | downstream | 765208 | 843748 ~ 937986 (-) |
| LOC110509492 | LOC106562836 | other | downstream | 1275045 | 425727 ~ 437447 (-) |
| LOC110509490 | LOC106562833 | other | downstream | 1301562 | 398511 ~ 425356 (-) |
| LOC110509525 | LOC106562824 | other | upstream | 1615306 | 3317596 ~ 3324117 (-) |
| G2143134 | NA | other | upstream | 1924528 | 3628165 ~ 3635240 (-) |
| LOC110509531 | LOC106570883 | other | upstream | 2618262 | 4208866 ~ 4430679 (-) |
| G2144911 | NA | other | upstream | 3511446 | 5215083 ~ 5226311 (-) |
| G2145316 | opi-1 | other | upstream | 3937839 | 5641476 ~ 5672690 (-) |
