Gene
RNA
| Item | Value |
|---|---|
| gene id | G2142212 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048593.1 |
| NCBI id | CM023247.2 |
| chromosome length | 47748341 |
| location | 2999441 ~ 3000124 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2450101 | True | 684 | lncRNA | 0.39 | 1 | 2999441 | 3000124 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110509518 | LOC106578716 | coding | upstream | 340065 | 2656641 ~ 2659376 (+) |
| trnas-cga-51 | NA | coding | upstream | 515088 | 2484272 ~ 2484353 (+) |
| LOC118945387 | NA | coding | upstream | 648632 | 2350691 ~ 2350809 (+) |
| LOC118945463 | NA | coding | upstream | 648928 | 2350395 ~ 2350513 (+) |
| LOC118945457 | NA | coding | upstream | 649224 | 2350099 ~ 2350217 (+) |
| LOC110509521 | LOC100195713 | coding | downstream | 87915 | 3088039 ~ 3142362 (+) |
| LOC110509522 | gstt2b | coding | downstream | 165187 | 3165311 ~ 3170636 (+) |
| LOC110509523 | ppp6c | coding | downstream | 236686 | 3236810 ~ 3261067 (+) |
| LOC118945358 | LOC106570398 | coding | downstream | 274284 | 3274408 ~ 3287599 (+) |
| LOC110509524 | LOC106562843 | coding | downstream | 292066 | 3292190 ~ 3311174 (+) |
| G2142206 | NA | non-coding | upstream | 5792 | 2983901 ~ 2993649 (+) |
| G2142208 | NA | non-coding | upstream | 9156 | 2984969 ~ 2990285 (+) |
| G2142209 | NA | non-coding | upstream | 13330 | 2985158 ~ 2986111 (+) |
| G2142205 | NA | non-coding | upstream | 23858 | 2972624 ~ 2975583 (+) |
| G2142204 | NA | non-coding | upstream | 29475 | 2969597 ~ 2969966 (+) |
| G2142214 | NA | non-coding | downstream | 4760 | 3004884 ~ 3005177 (+) |
| G2142276 | NA | non-coding | downstream | 82591 | 3082715 ~ 3082964 (+) |
| G2142278 | NA | non-coding | downstream | 84316 | 3084440 ~ 3084796 (+) |
| G2142280 | NA | non-coding | downstream | 85113 | 3085237 ~ 3085447 (+) |
| G2142235 | NA | non-coding | downstream | 93665 | 3093789 ~ 3095412 (+) |
| LOC110509554 | LOC105007341 | other | upstream | 1058450 | 1935597 ~ 1941376 (+) |
| LOC110509295 | LOC106562719 | other | upstream | 1420882 | 1572502 ~ 1618684 (+) |
| LOC110509506 | LOC106562870 | other | upstream | 1569707 | 1271496 ~ 1429741 (+) |
| G2139520 | LOC106562868 | other | upstream | 2145654 | 852249 ~ 853787 (+) |
| LOC110509291 | LOC106562839 | other | upstream | 2408637 | 536258 ~ 614583 (+) |
| G2142277 | NA | other | downstream | 83093 | 3083217 ~ 3083571 (+) |
| G2142386 | LOC106562824 | other | downstream | 318825 | 3318949 ~ 3324094 (+) |
| G2144385 | NA | other | downstream | 2027627 | 5027751 ~ 5028239 (+) |
| G2144416 | NA | other | downstream | 2035065 | 5035189 ~ 5035913 (+) |
| G2144756 | NA | other | downstream | 2283737 | 5283861 ~ 5284603 (+) |
