G2142440


Basic Information

Item Value
gene id G2142440
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048593.1
NCBI id CM023247.2
chromosome length 47748341
location 3399090 ~ 3401178 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2450348
tagaaaagagcagaatctcTAACTATCCATTCAGACCATAGTCCtgtctacctacaggttatagaaaagagcagaatctctgaactatccattcagaccccagtcctgtcTACCTACGGGtaatagaaaagagcagaatctcTAAACTATCAGTTCAAGCAACAGTCCtgtctacctacaggttatagaaaagagcagaatctctaactatccattcagaccccagtcctgtcTACCTAcgggttatagaaaagagcagaatctcTAAACTATCccttcagaccccagtcctgtctacctacaggttatagaaaagagcagaatctcTGAACTATCTGTTAGACCCCAGTCCtgtctaccta

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2450348 True 362 lncRNA 0.42 2 3399090 3401178

Neighbor

gene id symbol gene type direction distance location
LOC118945281 NA coding upstream 30664 3322159 ~ 3368426 (+)
LOC110509524 LOC106562843 coding upstream 87916 3292190 ~ 3311174 (+)
LOC118945358 LOC106570398 coding upstream 111491 3274408 ~ 3287599 (+)
LOC110509523 ppp6c coding upstream 138023 3236810 ~ 3261067 (+)
LOC110509522 gstt2b coding upstream 228454 3165311 ~ 3170636 (+)
LOC118945361 NA coding downstream 143869 3545047 ~ 3555150 (+)
LOC110509527 NA coding downstream 304568 3705668 ~ 3731529 (+)
LOC110509530 LOC106562884 coding downstream 721228 4122406 ~ 4124726 (+)
LOC110509300 NA coding downstream 768924 4170102 ~ 4207105 (+)
LOC110509532 LOC106562866 coding downstream 1073456 4474634 ~ 4485633 (+)
G2142386 LOC106562824 non-coding upstream 74996 3318949 ~ 3324094 (+)
G2142365 NA non-coding upstream 144459 3252586 ~ 3254631 (+)
G2142235 NA non-coding upstream 303678 3093789 ~ 3095412 (+)
G2142280 NA non-coding upstream 313643 3085237 ~ 3085447 (+)
G2142278 NA non-coding upstream 314294 3084440 ~ 3084796 (+)
G2142533 NA non-coding downstream 140004 3541182 ~ 3541398 (+)
G2142543 NA non-coding downstream 158976 3560154 ~ 3560397 (+)
G2142546 NA non-coding downstream 162718 3563896 ~ 3564120 (+)
G2142548 NA non-coding downstream 165430 3566608 ~ 3566822 (+)
G2142555 NA non-coding downstream 171366 3572544 ~ 3572791 (+)
G2142277 NA other upstream 315519 3083217 ~ 3083571 (+)
LOC110509554 LOC105007341 other upstream 1458099 1935597 ~ 1941376 (+)
LOC110509295 LOC106562719 other upstream 1820531 1572502 ~ 1618684 (+)
LOC110509506 LOC106562870 other upstream 1969356 1271496 ~ 1429741 (+)
G2144385 NA other downstream 1626573 5027751 ~ 5028239 (+)
G2144416 NA other downstream 1634011 5035189 ~ 5035913 (+)
G2144756 NA other downstream 1882683 5283861 ~ 5284603 (+)
G2144802 NA other downstream 1958808 5359986 ~ 5375497 (+)
LOC110509544 LOC106562892 other downstream 2204871 5605462 ~ 5611062 (+)

Expression


Co-expression Network