Gene
RNA
| Item | Value |
|---|---|
| gene id | G2143834 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048593.1 |
| NCBI id | CM023247.2 |
| chromosome length | 47748341 |
| location | 4194829 ~ 4197790 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2451821 | False | 634 | lncRNA | 0.39 | 4 | 4194829 | 4196426 |
| TU2451820 | True | 358 | lncRNA | 0.38 | 3 | 4195175 | 4197790 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110509299 | ptpa | coding | downstream | 35938 | 4148460 ~ 4158891 (-) |
| LOC110509529 | NA | coding | downstream | 132349 | 4044281 ~ 4062480 (-) |
| LOC110509526 | LOC106562882 | coding | downstream | 719402 | 3449799 ~ 3475427 (-) |
| LOC110509525 | LOC106562824 | coding | downstream | 870712 | 3317596 ~ 3324117 (-) |
| LOC110509519 | LOC106562828 | coding | downstream | 1114609 | 3065595 ~ 3080220 (-) |
| LOC110509531 | LOC106570883 | coding | upstream | 11076 | 4208866 ~ 4430679 (-) |
| LOC118945302 | NA | coding | upstream | 27633 | 4225423 ~ 4229194 (-) |
| LOC110509302 | psmb7 | coding | upstream | 422609 | 4620399 ~ 4636327 (-) |
| LOC110509533 | LOC106562887 | coding | upstream | 487734 | 4685524 ~ 4690341 (-) |
| LOC110509534 | LOC105021738 | coding | upstream | 624403 | 4822193 ~ 4852134 (-) |
| G2143605 | NA | non-coding | downstream | 33000 | 4161602 ~ 4161829 (-) |
| G2143590 | NA | non-coding | downstream | 48567 | 4145982 ~ 4146262 (-) |
| G2143589 | NA | non-coding | downstream | 50213 | 4144244 ~ 4144616 (-) |
| G2143586 | NA | non-coding | downstream | 52821 | 4141743 ~ 4142008 (-) |
| G2144064 | NA | non-coding | upstream | 362883 | 4560673 ~ 4561262 (-) |
| G2144072 | NA | non-coding | upstream | 368616 | 4566406 ~ 4566625 (-) |
| G2144086 | LOC106583873 | non-coding | upstream | 378718 | 4576508 ~ 4577228 (-) |
| G2143134 | NA | other | downstream | 559589 | 3628165 ~ 3635240 (-) |
| G2141289 | LOC100380853 | other | downstream | 2545098 | 1649299 ~ 1649731 (-) |
| G2141258 | NA | other | downstream | 2581620 | 1598021 ~ 1613209 (-) |
| LOC110509502 | LOC106562868 | other | downstream | 3256920 | 843748 ~ 937986 (-) |
| G2144911 | NA | other | upstream | 1017293 | 5215083 ~ 5226311 (-) |
| G2145316 | opi-1 | other | upstream | 1443686 | 5641476 ~ 5672690 (-) |
| G2145335 | NA | other | upstream | 1551896 | 5749686 ~ 5755666 (-) |
| G2145511 | NA | other | upstream | 1609275 | 5807065 ~ 5807624 (-) |
