Gene
RNA
| Item | Value |
|---|---|
| gene id | G2144072 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048593.1 |
| NCBI id | CM023247.2 |
| chromosome length | 47748341 |
| location | 4566406 ~ 4566625 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2452080 | True | 220 | lncRNA | 0.48 | 1 | 4566406 | 4566625 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110509531 | LOC106570883 | coding | downstream | 135727 | 4208866 ~ 4430679 (-) |
| LOC118945302 | NA | coding | downstream | 337212 | 4225423 ~ 4229194 (-) |
| LOC110509299 | ptpa | coding | downstream | 407515 | 4148460 ~ 4158891 (-) |
| LOC110509529 | NA | coding | downstream | 503926 | 4044281 ~ 4062480 (-) |
| LOC110509526 | LOC106562882 | coding | downstream | 1090979 | 3449799 ~ 3475427 (-) |
| LOC110509302 | psmb7 | coding | upstream | 53774 | 4620399 ~ 4636327 (-) |
| LOC110509533 | LOC106562887 | coding | upstream | 118899 | 4685524 ~ 4690341 (-) |
| LOC110509534 | LOC105021738 | coding | upstream | 255568 | 4822193 ~ 4852134 (-) |
| LOC110509535 | purg | coding | upstream | 300085 | 4866710 ~ 4871169 (-) |
| LOC110509538 | LOC106562893 | coding | upstream | 501974 | 5068599 ~ 5124878 (-) |
| G2144064 | NA | non-coding | downstream | 5144 | 4560673 ~ 4561262 (-) |
| G2143834 | NA | non-coding | downstream | 368616 | 4194829 ~ 4197790 (-) |
| G2143835 | NA | non-coding | downstream | 370737 | 4195362 ~ 4195669 (-) |
| G2144086 | LOC106583873 | non-coding | upstream | 9883 | 4576508 ~ 4577228 (-) |
| G2144098 | NA | non-coding | upstream | 22749 | 4589374 ~ 4589685 (-) |
| G2144151 | NA | non-coding | upstream | 78349 | 4644974 ~ 4645334 (-) |
| G2144156 | NA | non-coding | upstream | 98138 | 4664763 ~ 4664999 (-) |
| G2143134 | NA | other | downstream | 931166 | 3628165 ~ 3635240 (-) |
| LOC110509525 | LOC106562824 | other | downstream | 1242310 | 3317596 ~ 3324117 (-) |
| G2141289 | LOC100380853 | other | downstream | 2916675 | 1649299 ~ 1649731 (-) |
| G2141258 | NA | other | downstream | 2953197 | 1598021 ~ 1613209 (-) |
| G2144911 | NA | other | upstream | 648458 | 5215083 ~ 5226311 (-) |
| G2145316 | opi-1 | other | upstream | 1074851 | 5641476 ~ 5672690 (-) |
| G2145335 | NA | other | upstream | 1183061 | 5749686 ~ 5755666 (-) |
| G2145511 | NA | other | upstream | 1240440 | 5807065 ~ 5807624 (-) |
| G2145604 | NA | other | upstream | 1534146 | 6100771 ~ 6108752 (-) |
