Gene
RNA
| Item | Value |
|---|---|
| gene id | G2144192 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048593.1 |
| NCBI id | CM023247.2 |
| chromosome length | 47748341 |
| location | 4701507 ~ 4701790 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2452202 | True | 284 | lncRNA | 0.29 | 1 | 4701507 | 4701790 |
4,700,400
4,700,800
4,701,200
4,701,600
4,702,000
4,702,400
4,702,400
4,702,800
4,703,200
4,703,600
4,704,000
4,704,400
NC_048593.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110509532 | LOC106562866 | coding | upstream | 215874 | 4474634 ~ 4485633 (+) |
| LOC110509300 | NA | coding | upstream | 494522 | 4170102 ~ 4207105 (+) |
| LOC110509530 | LOC106562884 | coding | upstream | 576781 | 4122406 ~ 4124726 (+) |
| LOC110509527 | NA | coding | upstream | 969978 | 3705668 ~ 3731529 (+) |
| LOC118945361 | NA | coding | upstream | 1146357 | 3545047 ~ 3555150 (+) |
| LOC110509354 | pde4d | coding | downstream | 44560 | 4746350 ~ 4777161 (+) |
| LOC110509536 | LOC106562892 | coding | downstream | 250826 | 4952616 ~ 5021603 (+) |
| LOC110509539 | LOC106562896 | coding | downstream | 468072 | 5169862 ~ 5257753 (+) |
| LOC118945351 | NA | coding | downstream | 556303 | 5258093 ~ 5260025 (+) |
| LOC110509541 | LOC106562900 | coding | downstream | 639585 | 5341375 ~ 5479000 (+) |
| G2144174 | LOC106562887 | non-coding | upstream | 12805 | 4687089 ~ 4688702 (+) |
| G2144157 | NA | non-coding | upstream | 28810 | 4665550 ~ 4672697 (+) |
| G2144155 | NA | non-coding | upstream | 37447 | 4663670 ~ 4664060 (+) |
| G2144154 | NA | non-coding | upstream | 43411 | 4657825 ~ 4658096 (+) |
| G2144153 | NA | non-coding | upstream | 45420 | 4655758 ~ 4656087 (+) |
| G2144193 | NA | non-coding | downstream | 390 | 4702180 ~ 4702392 (+) |
| G2144197 | NA | non-coding | downstream | 4093 | 4705883 ~ 4707191 (+) |
| G2144206 | NA | non-coding | downstream | 12254 | 4714044 ~ 4714253 (+) |
| G2144209 | NA | non-coding | downstream | 15991 | 4717781 ~ 4717998 (+) |
| G2144236 | NA | non-coding | downstream | 41539 | 4743329 ~ 4775444 (+) |
| G2142386 | LOC106562824 | other | upstream | 1377413 | 3318949 ~ 3324094 (+) |
| G2142277 | NA | other | upstream | 1617936 | 3083217 ~ 3083571 (+) |
| LOC110509554 | LOC105007341 | other | upstream | 2760516 | 1935597 ~ 1941376 (+) |
| LOC110509295 | LOC106562719 | other | upstream | 3122948 | 1572502 ~ 1618684 (+) |
| LOC110509506 | LOC106562870 | other | upstream | 3271773 | 1271496 ~ 1429741 (+) |
| G2144385 | NA | other | downstream | 325961 | 5027751 ~ 5028239 (+) |
| G2144416 | NA | other | downstream | 333399 | 5035189 ~ 5035913 (+) |
| G2144756 | NA | other | downstream | 582071 | 5283861 ~ 5284603 (+) |
| G2144802 | NA | other | downstream | 658196 | 5359986 ~ 5375497 (+) |
| LOC110509544 | LOC106562892 | other | downstream | 904259 | 5605462 ~ 5611062 (+) |
