Gene
RNA
| Item | Value |
|---|---|
| gene id | G2144544 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048593.1 |
| NCBI id | CM023247.2 |
| chromosome length | 47748341 |
| location | 5005991 ~ 5006226 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2452569 | True | 236 | lncRNA | 0.48 | 1 | 5005991 | 5006226 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110509535 | purg | coding | downstream | 134822 | 4866710 ~ 4871169 (-) |
| LOC110509534 | LOC105021738 | coding | downstream | 153857 | 4822193 ~ 4852134 (-) |
| LOC110509533 | LOC106562887 | coding | downstream | 315650 | 4685524 ~ 4690341 (-) |
| LOC110509302 | psmb7 | coding | downstream | 382555 | 4620399 ~ 4636327 (-) |
| LOC118945302 | NA | coding | downstream | 776797 | 4225423 ~ 4229194 (-) |
| LOC110509538 | LOC106562893 | coding | upstream | 62373 | 5068599 ~ 5124878 (-) |
| LOC110509542 | fbxw2 | coding | upstream | 508665 | 5514891 ~ 5523585 (-) |
| LOC118945317 | NA | coding | upstream | 635226 | 5641452 ~ 5641777 (-) |
| LOC118945316 | NA | coding | upstream | 635625 | 5641851 ~ 5643016 (-) |
| opi-1 | opi-1 | coding | upstream | 650360 | 5656586 ~ 5658119 (-) |
| G2144510 | LOC106562892 | non-coding | downstream | 51982 | 4953441 ~ 4954009 (-) |
| G2144448 | NA | non-coding | downstream | 152976 | 4852691 ~ 4853015 (-) |
| G2144440 | NA | non-coding | downstream | 162095 | 4843371 ~ 4843896 (-) |
| G2144300 | NA | non-coding | downstream | 185315 | 4820461 ~ 4820676 (-) |
| G2144295 | NA | non-coding | downstream | 210716 | 4794692 ~ 4795275 (-) |
| G2144548 | NA | non-coding | upstream | 4511 | 5010737 ~ 5010988 (-) |
| G2144550 | NA | non-coding | upstream | 5819 | 5012045 ~ 5012492 (-) |
| G2144552 | NA | non-coding | upstream | 8419 | 5014645 ~ 5015479 (-) |
| G2144555 | NA | non-coding | upstream | 13054 | 5019280 ~ 5019543 (-) |
| G2144556 | LOC106562892 | non-coding | upstream | 14028 | 5020254 ~ 5021562 (-) |
| LOC110509531 | LOC106570883 | other | downstream | 575455 | 4208866 ~ 4430679 (-) |
| G2143134 | NA | other | downstream | 1370751 | 3628165 ~ 3635240 (-) |
| LOC110509525 | LOC106562824 | other | downstream | 1681895 | 3317596 ~ 3324117 (-) |
| G2141289 | LOC100380853 | other | downstream | 3356260 | 1649299 ~ 1649731 (-) |
| G2141258 | NA | other | downstream | 3392782 | 1598021 ~ 1613209 (-) |
| G2144911 | NA | other | upstream | 208857 | 5215083 ~ 5226311 (-) |
| G2145316 | opi-1 | other | upstream | 635250 | 5641476 ~ 5672690 (-) |
| G2145335 | NA | other | upstream | 743460 | 5749686 ~ 5755666 (-) |
| G2145511 | NA | other | upstream | 800839 | 5807065 ~ 5807624 (-) |
| G2145604 | NA | other | upstream | 1094545 | 6100771 ~ 6108752 (-) |
