G2144558


Basic Information

Item Value
gene id G2144558
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048593.1
NCBI id CM023247.2
chromosome length 47748341
location 5026210 ~ 5027176 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2452588
cggttaagatatcgtttaggaccttgagcgtggctgaggtgcacccatgaccagctctgaaaccagattgcatagcagagaaggtatggtgagattcgaaatggtcggtaatctgttgacttggctttcgaagaccttagaaaggcatggtaggatagatataggtctgtagcagtttggatcaagagtgtcccccccctttgaagaggggggtgaccgcagctgctttccaatctttgggaatctcagacgacacgaaagagaggttgaacaggctagtaataggggtggcaacaatttcggcagataattttagaaagaaagggtccagattgtctagcccggctgatttgtaggggtccagattttgcagctctttcagaacatcagctgaatggggaaggcttgggcgagttgctgttgggggtgcagtgcttttgacaggggtaggagtagccaggtggaaagcatggccagcagtagaaaaatgcttattgaaatgttcaattatggtggatttatcagtggtgacagtgtttcctatcttcagtgcagtgggcagctgggaggaggtgttcttattctccatggactttacagtgtcccagaacttttttgagttagtgttgcaagaagcaaatttctgcttgaaaaagctagccttggcttttctaactgcctgtgtataatggtttctagcttccctgaacagctgcatatcacgggggctgtgcgatgctaatgcagaacgccataggatgtttttgtgttggttaagggcagtcaggtctggggagaaccaagggctatatctgttcctggttctaaatttcttgaatggggcatgtttatttaagatggttaggaaggcatttaaaaaaaatatccaggcatcctctactgacgggatgaggtcaatatccttccaggataccccggccaggtcgattagaaaggcctgctcgct

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2452588 True 967 lncRNA 0.47 1 5026210 5027176
Loading

Neighbor

gene id symbol gene type direction distance location
LOC110509535 purg coding downstream 155041 4866710 ~ 4871169 (-)
LOC110509534 LOC105021738 coding downstream 174076 4822193 ~ 4852134 (-)
LOC110509533 LOC106562887 coding downstream 335869 4685524 ~ 4690341 (-)
LOC110509302 psmb7 coding downstream 402774 4620399 ~ 4636327 (-)
LOC118945302 NA coding downstream 797016 4225423 ~ 4229194 (-)
LOC110509538 LOC106562893 coding upstream 41423 5068599 ~ 5124878 (-)
LOC110509542 fbxw2 coding upstream 487715 5514891 ~ 5523585 (-)
LOC118945317 NA coding upstream 614276 5641452 ~ 5641777 (-)
LOC118945316 NA coding upstream 614675 5641851 ~ 5643016 (-)
opi-1 opi-1 coding upstream 629410 5656586 ~ 5658119 (-)
G2144556 LOC106562892 non-coding downstream 4648 5020254 ~ 5021562 (-)
G2144555 NA non-coding downstream 6667 5019280 ~ 5019543 (-)
G2144552 NA non-coding downstream 10731 5014645 ~ 5015479 (-)
G2144550 NA non-coding downstream 13718 5012045 ~ 5012492 (-)
G2144548 NA non-coding downstream 15222 5010737 ~ 5010988 (-)
G2144559 NA non-coding upstream 51 5027227 ~ 5028359 (-)
G2144560 NA non-coding upstream 1385 5028561 ~ 5029048 (-)
G2144561 NA non-coding upstream 1925 5029101 ~ 5029497 (-)
G2144562 NA non-coding upstream 2376 5029552 ~ 5029764 (-)
G2144567 NA non-coding upstream 8359 5035535 ~ 5035740 (-)
LOC110509531 LOC106570883 other downstream 595674 4208866 ~ 4430679 (-)
G2143134 NA other downstream 1390970 3628165 ~ 3635240 (-)
LOC110509525 LOC106562824 other downstream 1702114 3317596 ~ 3324117 (-)
G2141289 LOC100380853 other downstream 3376479 1649299 ~ 1649731 (-)
G2141258 NA other downstream 3413001 1598021 ~ 1613209 (-)
G2144911 NA other upstream 187907 5215083 ~ 5226311 (-)
G2145316 opi-1 other upstream 614300 5641476 ~ 5672690 (-)
G2145335 NA other upstream 722510 5749686 ~ 5755666 (-)
G2145511 NA other upstream 779889 5807065 ~ 5807624 (-)
G2145604 NA other upstream 1073595 6100771 ~ 6108752 (-)

Expression

G2144558 Expression in all Baseline Samples

Bar chart with 20 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 5.
End of interactive chart.

G2144558 Expression in each Bioproject

Bar chart with 18 bars.
G2144558 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 100.
End of interactive chart.

Co-expression Network