Gene
RNA
| Item | Value |
|---|---|
| gene id | G2144560 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048593.1 |
| NCBI id | CM023247.2 |
| chromosome length | 47748341 |
| location | 5028561 ~ 5029048 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2452590 | True | 488 | lncRNA | 0.34 | 1 | 5028561 | 5029048 |
5,027,600
5,028,000
5,028,400
5,028,800
5,029,200
5,029,600
5,030,000
5,030,000
5,030,400
5,030,800
5,031,200
5,031,600
5,032,000
5,032,400
NC_048593.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110509535 | purg | coding | downstream | 157392 | 4866710 ~ 4871169 (-) |
| LOC110509534 | LOC105021738 | coding | downstream | 176427 | 4822193 ~ 4852134 (-) |
| LOC110509533 | LOC106562887 | coding | downstream | 338220 | 4685524 ~ 4690341 (-) |
| LOC110509302 | psmb7 | coding | downstream | 405125 | 4620399 ~ 4636327 (-) |
| LOC118945302 | NA | coding | downstream | 799367 | 4225423 ~ 4229194 (-) |
| LOC110509538 | LOC106562893 | coding | upstream | 39551 | 5068599 ~ 5124878 (-) |
| LOC110509542 | fbxw2 | coding | upstream | 485843 | 5514891 ~ 5523585 (-) |
| LOC118945317 | NA | coding | upstream | 612404 | 5641452 ~ 5641777 (-) |
| LOC118945316 | NA | coding | upstream | 612803 | 5641851 ~ 5643016 (-) |
| opi-1 | opi-1 | coding | upstream | 627538 | 5656586 ~ 5658119 (-) |
| G2144559 | NA | non-coding | downstream | 202 | 5027227 ~ 5028359 (-) |
| G2144558 | NA | non-coding | downstream | 1385 | 5026210 ~ 5027176 (-) |
| G2144556 | LOC106562892 | non-coding | downstream | 6999 | 5020254 ~ 5021562 (-) |
| G2144555 | NA | non-coding | downstream | 9018 | 5019280 ~ 5019543 (-) |
| G2144552 | NA | non-coding | downstream | 13082 | 5014645 ~ 5015479 (-) |
| G2144561 | NA | non-coding | upstream | 53 | 5029101 ~ 5029497 (-) |
| G2144562 | NA | non-coding | upstream | 504 | 5029552 ~ 5029764 (-) |
| G2144567 | NA | non-coding | upstream | 6487 | 5035535 ~ 5035740 (-) |
| G2144503 | NA | non-coding | upstream | 15083 | 5044131 ~ 5044273 (-) |
| G2144669 | NA | non-coding | upstream | 83313 | 5112361 ~ 5147151 (-) |
| LOC110509531 | LOC106570883 | other | downstream | 598025 | 4208866 ~ 4430679 (-) |
| G2143134 | NA | other | downstream | 1393321 | 3628165 ~ 3635240 (-) |
| LOC110509525 | LOC106562824 | other | downstream | 1704465 | 3317596 ~ 3324117 (-) |
| G2141289 | LOC100380853 | other | downstream | 3378830 | 1649299 ~ 1649731 (-) |
| G2141258 | NA | other | downstream | 3415352 | 1598021 ~ 1613209 (-) |
| G2144911 | NA | other | upstream | 186035 | 5215083 ~ 5226311 (-) |
| G2145316 | opi-1 | other | upstream | 612428 | 5641476 ~ 5672690 (-) |
| G2145335 | NA | other | upstream | 720638 | 5749686 ~ 5755666 (-) |
| G2145511 | NA | other | upstream | 778017 | 5807065 ~ 5807624 (-) |
| G2145604 | NA | other | upstream | 1071723 | 6100771 ~ 6108752 (-) |
