Gene
RNA
| Item | Value |
|---|---|
| gene id | G2144669 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048593.1 |
| NCBI id | CM023247.2 |
| chromosome length | 47748341 |
| location | 5112361 ~ 5147151 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2452707 | True | 409 | lncRNA | 0.40 | 3 | 5112361 | 5147151 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110509535 | purg | coding | downstream | 241192 | 4866710 ~ 4871169 (-) |
| LOC110509534 | LOC105021738 | coding | downstream | 260227 | 4822193 ~ 4852134 (-) |
| LOC110509533 | LOC106562887 | coding | downstream | 422020 | 4685524 ~ 4690341 (-) |
| LOC110509302 | psmb7 | coding | downstream | 488925 | 4620399 ~ 4636327 (-) |
| LOC118945302 | NA | coding | downstream | 883167 | 4225423 ~ 4229194 (-) |
| LOC110509542 | fbxw2 | coding | upstream | 367740 | 5514891 ~ 5523585 (-) |
| LOC118945317 | NA | coding | upstream | 494301 | 5641452 ~ 5641777 (-) |
| LOC118945316 | NA | coding | upstream | 494700 | 5641851 ~ 5643016 (-) |
| opi-1 | opi-1 | coding | upstream | 509435 | 5656586 ~ 5658119 (-) |
| LOC110509355 | LOC106581842 | coding | upstream | 516078 | 5663229 ~ 5663766 (-) |
| G2144503 | NA | non-coding | downstream | 68088 | 5044131 ~ 5044273 (-) |
| G2144567 | NA | non-coding | downstream | 76621 | 5035535 ~ 5035740 (-) |
| G2144562 | NA | non-coding | downstream | 82597 | 5029552 ~ 5029764 (-) |
| G2144561 | NA | non-coding | downstream | 82864 | 5029101 ~ 5029497 (-) |
| G2144560 | NA | non-coding | downstream | 83313 | 5028561 ~ 5029048 (-) |
| G2144689 | NA | non-coding | upstream | 5109 | 5152260 ~ 5152477 (-) |
| G2144911 | NA | non-coding | upstream | 69166 | 5215083 ~ 5226311 (-) |
| G2144912 | NA | non-coding | upstream | 69329 | 5216480 ~ 5219637 (-) |
| G2144913 | NA | non-coding | upstream | 70027 | 5217178 ~ 5225429 (-) |
| G2144915 | NA | non-coding | upstream | 74723 | 5221874 ~ 5224262 (-) |
| LOC110509531 | LOC106570883 | other | downstream | 681825 | 4208866 ~ 4430679 (-) |
| G2143134 | NA | other | downstream | 1477121 | 3628165 ~ 3635240 (-) |
| LOC110509525 | LOC106562824 | other | downstream | 1788265 | 3317596 ~ 3324117 (-) |
| G2141289 | LOC100380853 | other | downstream | 3462630 | 1649299 ~ 1649731 (-) |
| G2141258 | NA | other | downstream | 3499152 | 1598021 ~ 1613209 (-) |
| G2145316 | opi-1 | other | upstream | 494325 | 5641476 ~ 5672690 (-) |
| G2145335 | NA | other | upstream | 602535 | 5749686 ~ 5755666 (-) |
| G2145511 | NA | other | upstream | 659914 | 5807065 ~ 5807624 (-) |
| G2145604 | NA | other | upstream | 953620 | 6100771 ~ 6108752 (-) |
