G2144911


Basic Information

Item Value
gene id G2144911
gene name NA
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048593.1
NCBI id CM023247.2
chromosome length 47748341
location 5215083 ~ 5226311 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2452980
ATGATAGAATCAATTTCCTgttgcaggtttataatgttagagagcagcttattgatgtcctgatgcaggtttaaaatgttagggagcagcttattgatgtcctgatgcaggtttataatgtctgggagcagcttattgatgtcctgatgcaggtttataatgtttgggagcagcttattgatgtcctgatgcaggtttataatgtctgggagcagcttattgatgtcctgatgcaggtttataatgtctgggagcagCTTATtaatgtcctgatgcaggtttataatgtctgggagcagcttattgatgtcctgatgcaggtttataatgttagggagcagcttattgatgtcctgatgcaggtttataatgttagggagcagcttattgatgtcctgatgcaggtttgtaatgttagggagcagcttattgatgtcctgatgaaggtttataatgttatggagcagattattgatgtcctgatgcaggtttataatgttagggagcagcttattgatgtcctgatgctggtttataatgtttgggagcagttt
>TU2452975
tataatgttagggagcagtTTATTgttgtcctgatgcaggtttgtaatgttagggagcagcttattgatgtcctgatgcaggtttgtaatgttagggagcagcttattgatgtcctgatgaaggtttataatgttatggagcagattattgatgtcctgatgcaggtttataatgttagggagcagcttattgatgtcctgatgctggtttataatgtttgggagcagtttattgatgtcctgatgcaggtttataatgttaggtaGCAGTTtactgatgtcctgatgcaggtttataatgtttgggagcatcttattgatgtcctgatgcaggttta
>TU2452976
ATGATAGAATCAATTTCCTgttgcaggtttataatgttagagagcagcttattgatgtcctgatgcaggtttaaaatgttagggagcagcttattgatgtcctgatgcaggtttataatgtctgggagcagcttattgatgtcctgatgcaggtttataatgtttgggagcagcttattgatgtcctgatgcaggtttataatgtctgggagcagcttattgatgtcctgatgcaggtttataatgtctgggagcagattattgatgtcctgatgctggtttataatgttagggagcagtttattgatgtcctgatgcaggtttgtaatgttagggagcagcttattgatgtcctgatgcaggtttataatgttagggagcagtttattgatgtcctgatgcaggtttgtaatgttagggagcagcttattgatgtcctgatgcaggtttataatgttagggagcagtttattgatgtcctgatgcaggtttgtaatgttagggagcagcttattgatgtcctgatgcaggtttataa
>TU2452978
ATGATAGAATCAATTTCCTgttgcaggtttataatgttagagagcagcttattgatgtcctgatgcaggtttaaaatgttagggagcagcttattgatgtcctgatgcaggtttataatgtctgggagcagcttattgatgtcctgatgcaggtttataatgttagggagcagattattgatgtcctgatgcaggtttataatgttagggaaCAGCTT
>TU2452979
ATGATAGAATCAATTTCCTgttgcaggtttataatgttagagagcagcttattgatgtcctgatgcaggtttaaaatgttagggagcagcttattgatgtcctgatgcaggtttataatgtctgggagcagcttattgatgtcctgatgcaggtttataatgtttgggagcagcttattgatgtcctgatgcaggtttataatgtctgggagcagcttattgatgtcctgatgcaggtttataatgtctgggagcaggttattgatgtcctgatgaaggtttataatgtttgggagcagcttattgatgtcctaatgcaggtttataatgtttgggagcaggttattgatgtcctgaagcaggtttataatgttagggagcagcttattgatgtcctgatgcaggtttataatgttagggagcagcttattgatgtcctgatgcaggtttataatgttagggagcagcttattgatgtcctgatgcaggtttataatgtctgggagcagattattgatgtcc

Function

NR:

description
uncharacterized protein LOC105354118

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2452980 False 554 TUCP 0.40 5 5215083 5226311
TU2452975 False 338 lncRNA 0.39 3 5216317 5219465
TU2452976 False 538 TUCP 0.40 2 5218621 5226311
TU2452978 False 218 lncRNA 0.39 2 5223550 5226311
TU2452979 True 522 TUCP 0.40 2 5225706 5226311
Loading

Neighbor

gene id symbol gene type direction distance location
LOC110509538 LOC106562893 coding downstream 91439 5068599 ~ 5124878 (-)
LOC110509535 purg coding downstream 345148 4866710 ~ 4871169 (-)
LOC110509534 LOC105021738 coding downstream 364183 4822193 ~ 4852134 (-)
LOC110509533 LOC106562887 coding downstream 525976 4685524 ~ 4690341 (-)
LOC110509302 psmb7 coding downstream 592881 4620399 ~ 4636327 (-)
LOC110509542 fbxw2 coding upstream 288580 5514891 ~ 5523585 (-)
LOC118945317 NA coding upstream 415141 5641452 ~ 5641777 (-)
LOC118945316 NA coding upstream 415540 5641851 ~ 5643016 (-)
opi-1 opi-1 coding upstream 430275 5656586 ~ 5658119 (-)
LOC110509355 LOC106581842 coding upstream 436918 5663229 ~ 5663766 (-)
G2144689 NA non-coding downstream 63840 5152260 ~ 5152477 (-)
G2144669 NA non-coding downstream 69166 5112361 ~ 5147151 (-)
G2144503 NA non-coding downstream 172044 5044131 ~ 5044273 (-)
G2144567 NA non-coding downstream 180577 5035535 ~ 5035740 (-)
G2144562 NA non-coding downstream 186553 5029552 ~ 5029764 (-)
G2144939 NA non-coding upstream 42093 5268404 ~ 5323191 (-)
G2144981 NA non-coding upstream 120280 5346591 ~ 5356129 (-)
G2145066 NA non-coding upstream 254268 5480579 ~ 5483011 (-)
G2145068 NA non-coding upstream 259944 5486255 ~ 5486548 (-)
G2145069 NA non-coding upstream 260423 5486734 ~ 5486964 (-)
LOC110509531 LOC106570883 other downstream 785781 4208866 ~ 4430679 (-)
G2143134 NA other downstream 1581077 3628165 ~ 3635240 (-)
LOC110509525 LOC106562824 other downstream 1892221 3317596 ~ 3324117 (-)
G2141289 LOC100380853 other downstream 3566586 1649299 ~ 1649731 (-)
G2141258 NA other downstream 3603108 1598021 ~ 1613209 (-)
G2145316 opi-1 other upstream 415165 5641476 ~ 5672690 (-)
G2145335 NA other upstream 523375 5749686 ~ 5755666 (-)
G2145511 NA other upstream 580754 5807065 ~ 5807624 (-)
G2145604 NA other upstream 874460 6100771 ~ 6108752 (-)
G2145618 LOC106591448 other upstream 914755 6141066 ~ 6148494 (-)

Expression

G2144911 Expression in all Baseline Samples

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The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 30.
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G2144911 Expression in each Bioproject

Bar chart with 20 bars.
G2144911 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 750.
End of interactive chart.

Co-expression Network