Gene
RNA
| Item | Value |
|---|---|
| gene id | G2145316 |
| gene name | opi-1 |
| gene type | unknown |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048593.1 |
| NCBI id | CM023247.2 |
| chromosome length | 47748341 |
| location | 5641476 ~ 5672690 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| nidogen-2-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2453443 | True | 821 | TUCP | 0.45 | 8 | 5641476 | 5672690 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110509542 | fbxw2 | coding | downstream | 117891 | 5514891 ~ 5523585 (-) |
| LOC110509538 | LOC106562893 | coding | downstream | 516598 | 5068599 ~ 5124878 (-) |
| LOC110509535 | purg | coding | downstream | 770307 | 4866710 ~ 4871169 (-) |
| LOC110509534 | LOC105021738 | coding | downstream | 789342 | 4822193 ~ 4852134 (-) |
| LOC110509533 | LOC106562887 | coding | downstream | 951135 | 4685524 ~ 4690341 (-) |
| LOC118945331 | LOC106581842 | coding | upstream | 2855 | 5675545 ~ 5677433 (-) |
| LOC118945330 | opi-1 | coding | upstream | 11257 | 5683947 ~ 5685159 (-) |
| trnas-gga | NA | coding | upstream | 21478 | 5694168 ~ 5694249 (-) |
| trnat-cgu-78 | NA | coding | upstream | 31434 | 5704124 ~ 5704195 (-) |
| trnaa-ugc-214 | NA | coding | upstream | 31951 | 5704641 ~ 5704712 (-) |
| G2145302 | NA | non-coding | downstream | 24795 | 5616457 ~ 5616681 (-) |
| G2145236 | NA | non-coding | downstream | 39180 | 5602056 ~ 5602296 (-) |
| G2145206 | NA | non-coding | downstream | 70849 | 5569831 ~ 5570627 (-) |
| G2145205 | NA | non-coding | downstream | 71932 | 5568477 ~ 5569544 (-) |
| G2145163 | NA | non-coding | downstream | 82529 | 5558744 ~ 5558947 (-) |
| G2145326 | NA | non-coding | upstream | 22230 | 5694920 ~ 5703431 (-) |
| G2145328 | NA | non-coding | upstream | 23788 | 5696478 ~ 5788606 (-) |
| G2145336 | NA | non-coding | upstream | 36051 | 5708741 ~ 5748540 (-) |
| G2145342 | NA | non-coding | upstream | 71607 | 5744297 ~ 5751728 (-) |
| G2145344 | NA | non-coding | upstream | 78610 | 5751300 ~ 5753868 (-) |
| G2144911 | NA | other | downstream | 415165 | 5215083 ~ 5226311 (-) |
| LOC110509531 | LOC106570883 | other | downstream | 1210940 | 4208866 ~ 4430679 (-) |
| G2143134 | NA | other | downstream | 2006236 | 3628165 ~ 3635240 (-) |
| LOC110509525 | LOC106562824 | other | downstream | 2317380 | 3317596 ~ 3324117 (-) |
| G2141289 | LOC100380853 | other | downstream | 3991745 | 1649299 ~ 1649731 (-) |
| G2145335 | NA | other | upstream | 76996 | 5749686 ~ 5755666 (-) |
| G2145511 | NA | other | upstream | 134375 | 5807065 ~ 5807624 (-) |
| G2145604 | NA | other | upstream | 428081 | 6100771 ~ 6108752 (-) |
| G2145618 | LOC106591448 | other | upstream | 468376 | 6141066 ~ 6148494 (-) |
| G2145542 | NA | other | upstream | 476886 | 6137289 ~ 6252866 (-) |
