G2145335


Basic Information

Item Value
gene id G2145335
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048593.1
NCBI id CM023247.2
chromosome length 47748341
location 5749686 ~ 5755666 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2453473
ttccatgtgtaactctgtgttgttgtttgtgttgcactgctttgctttatcttggccaggtcgcagttgtgtatgagaacttgttcttaactggcttacctggtataataaaggagaaatttaaaaaaataagaaaccattttttttttcctAAGAAAGGGGTTGTAGCttagtggtagagcgcatgctttgcatgtatgaggtcctgggttcaatccttagcttctccatgtttttttttgcaaagacccaacttctactttccagaatgttgaaattctaagcaggaaacagagatgtgctaaatcatttggtcttgtaatctgaagaacatgttttcaatccctgttagtacatttatagaacagaagtggcatggttgccaacttttatggcatcattttcaaaaactgaagttcatgttttcgatccctgtccgtacctgttttaagaattgctgctatcatttcattgtagtttcaatggagtggtgtatatataaAGTACATTGTATTGATATTGCGTTTTATCTGCAAATgaaatgggatggaagctcagagggggagtgcatgctatataTGTATGAGGTCCTTTCTCCACTGAGTTTGTGTGTCAAAATCACATttgcacaactactactttccagaatgttgatgtatatatatagcatagggtggcatggtggccaagtggtaAGGCATCGGTCtcgtaaaccgaagatcatgggttcaaatcccatccgtgccTCTATAGAAAAGACTTCAATTTCCCTGGAAATGTTCATTCATTGGTGGACTTTGTAGAAAAGTCATGTTGTATCAATATTTGAACACAACTATTATATTAAGGGGAAGTATCTCTACGATAGAGCCACTTTACATGTTTGCTGTCCTACAGTATTCCCCAACTTGTCTTGTGAGAGTATTCACTTGttaaattagcttttgcacaactcccactttccacaATGTTGACATTCTAAGAATGAAATAGATGTgcaaagtcatctgtttttgttaactggagcacatgggttcaatccctGTTCGACGTTTATGGTAGATAGCTGATATTATGGAAATTTACTTTCATcacaacagtgtaaagaaaaggtcaattgtCTTGATAgggccactgcgacctgtatgctctagtcggctggccctcgctacatattcgtcgccagaaccactggctccaggtcatctgtaagtctatgctaggtaaagctccgccttatcaaaGCACTAACAGGCGGCCTAGTCCTCGCGCAGCAGTCCCttccagctgcagtcagagcaggagatgttcacccctccgcttccagactgcaaatcaatcccgcatgtgggaagccgccgctggctgatcccgccctggcctacttaaaaaaaacacaattaatctgaattagggccagactagttcccatcattttctcacattgccattgaa

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2453473 True 1455 TUCP 0.41 2 5749686 5755666

Neighbor

gene id symbol gene type direction distance location
trnaa-ugc-219 NA coding downstream 970 5748645 ~ 5748716 (-)
trnat-cgu-89 NA coding downstream 1482 5748133 ~ 5748204 (-)
trnaa-ugc-218 NA coding downstream 3221 5746394 ~ 5746465 (-)
trnat-cgu-88 NA coding downstream 3734 5745881 ~ 5745952 (-)
trnat-cgu-87 NA coding downstream 5996 5743619 ~ 5743690 (-)
trnat-ugu-46 NA coding upstream 13977 5769643 ~ 5769714 (-)
trnaa-cgc-7 NA coding upstream 27291 5782957 ~ 5783028 (-)
trnaa-cgc-8 NA coding upstream 38028 5793694 ~ 5793765 (-)
LOC110511721 NA coding upstream 71378 5827044 ~ 5827912 (-)
LOC118945579 NA coding upstream 140740 5896406 ~ 5929252 (-)
G2145336 NA non-coding downstream 1146 5708741 ~ 5748540 (-)
G2145326 NA non-coding downstream 46255 5694920 ~ 5703431 (-)
G2145314 NA non-coding downstream 79806 5638808 ~ 5669880 (-)
G2145313 NA non-coding downstream 81459 5637429 ~ 5668227 (-)
G2145302 NA non-coding downstream 133005 5616457 ~ 5616681 (-)
G2145345 NA non-coding upstream 15264 5770930 ~ 5777155 (-)
G2145347 NA non-coding upstream 15723 5771389 ~ 5777703 (-)
G2145356 NA non-coding upstream 38783 5794449 ~ 5797345 (-)
G2145510 NA non-coding upstream 50588 5806254 ~ 5806647 (-)
G2145512 NA non-coding upstream 53212 5808878 ~ 5809112 (-)
G2145316 opi-1 other downstream 76996 5641476 ~ 5672690 (-)
G2144911 NA other downstream 523375 5215083 ~ 5226311 (-)
LOC110509531 LOC106570883 other downstream 1319150 4208866 ~ 4430679 (-)
G2143134 NA other downstream 2114446 3628165 ~ 3635240 (-)
LOC110509525 LOC106562824 other downstream 2425590 3317596 ~ 3324117 (-)
G2145511 NA other upstream 51399 5807065 ~ 5807624 (-)
G2145604 NA other upstream 345105 6100771 ~ 6108752 (-)
G2145618 LOC106591448 other upstream 385400 6141066 ~ 6148494 (-)
G2145542 NA other upstream 393910 6137289 ~ 6252866 (-)
LOC110509559 NA other upstream 825525 6579264 ~ 6594474 (-)

Expression


Co-expression Network