G2145591


Basic Information

Item Value
gene id G2145591
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048593.1
NCBI id CM023247.2
chromosome length 47748341
location 6013567 ~ 6018394 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2453837
aaaaaataataatacttttgaaaaaataaaaatacaattaaaatgaatgataaagtcaaataaaagcatttatttttcttaatctatatattttccttggtacatatatatatatatatatacatacatacgtacgtacatacatacgcacatatacatacacacacacacctacgcacacgtactcaaaaactaaattaaaataaaaacacacacaaaaaaaaacacttgcagcagcactatcaaggttcttatcagctatttcaagcattcgctgagacgacgggccaataattcgtttttaggttttacagtaccttacacaacatgtatctgcgcatttccctagtcaccccgttcactctgtccagtttgaaatatagttgaatagtggagaccagagtctatcaaacttgggctgtctcttgtggaggtcataagtgagcttttcaagaggaagaaagtcaacaatctggtcaatccacattttaaatgtaggaggggtattagaggcccacaatagaagaatacatttcttagcaaagtatgtaatagtcataagcacattttctctgtcaggatcaagaacaa
>TU2453838
aaaaaataataatacttttgaaaaaataaaaatacaattaaaatgaatgataaagtcaaataaaagcatttatttttcttaatctatatattttccttggtacatatatatatatatatatacatacatacgtacgtacatacatacgcacatatacatacacacacacacgcacacgtactcaaaaactaaattaaaataaaaacacacacaaaaaaaaaacatttaacacttgcagcagcactatcaaggttcttatcagctatttcaagcattcgctgagacgacgggccaataattcgtttttaggttttacagtaccttacacaacatgtatctgcgcatttccctagtcaccccgttcactctgtccagtttgaaatatagttgaatagtggagaccagagtctatcaaacttgggctgtctcttgtggaggtcataagtgagcttttcaagaggaagaaagtcaacaatctggtcaatccacattttaaatgtaggaggggtattagaggcccacaatagaagaatacatttcttagcaaagtatgtaatagtcataagcacattttctctgtcaggatcaagaacaa

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2453837 False 591 lncRNA 0.33 3 6013567 6018394
TU2453838 True 595 lncRNA 0.33 3 6013567 6018394

Neighbor

gene id symbol gene type direction distance location
LOC118945553 NA coding downstream 116483 5896903 ~ 5897084 (-)
LOC118945579 NA coding downstream 117045 5896406 ~ 5929252 (-)
LOC110511721 NA coding downstream 185655 5827044 ~ 5827912 (-)
trnaa-cgc-8 NA coding downstream 219802 5793694 ~ 5793765 (-)
trnaa-cgc-7 NA coding downstream 230539 5782957 ~ 5783028 (-)
LOC110509559 NA coding upstream 562806 6579264 ~ 6594474 (-)
LOC118945709 NA coding upstream 575423 6593817 ~ 6593895 (-)
LOC118945279 NA coding upstream 586923 6605317 ~ 6607608 (-)
LOC110509561 LOC106562926 coding upstream 651782 6670176 ~ 6688054 (-)
LOC110509562 LOC106562929 coding upstream 671148 6689542 ~ 6712436 (-)
G2145550 NA non-coding downstream 41466 5877795 ~ 5972101 (-)
G2145587 NA non-coding downstream 56535 5953302 ~ 5957032 (-)
G2145580 NA non-coding downstream 76194 5929382 ~ 5937373 (-)
G2145532 NA non-coding downstream 163957 5849134 ~ 5849610 (-)
G2145600 NA non-coding upstream 78598 6096992 ~ 6119285 (-)
G2145603 NA non-coding upstream 81662 6100056 ~ 6108099 (-)
G2145606 NA non-coding upstream 84513 6102907 ~ 6124709 (-)
G2145614 LOC106586052 non-coding upstream 111855 6130249 ~ 6136885 (-)
G2145542 NA non-coding upstream 118895 6137289 ~ 6252866 (-)
G2145511 NA other downstream 205943 5807065 ~ 5807624 (-)
G2145335 NA other downstream 257901 5749686 ~ 5755666 (-)
G2145316 opi-1 other downstream 340877 5641476 ~ 5672690 (-)
G2144911 NA other downstream 787256 5215083 ~ 5226311 (-)
LOC110509531 LOC106570883 other downstream 1583031 4208866 ~ 4430679 (-)
G2145604 NA other upstream 82377 6100771 ~ 6108752 (-)
G2145618 LOC106591448 other upstream 122672 6141066 ~ 6148494 (-)
G2146036 NA other upstream 630784 6649178 ~ 6649663 (-)

Expression


Co-expression Network